Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_G07
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704... 56 4e-08
03_05_0377 + 23613181-23613342,23614469-23614501,23614606-236148... 55 8e-08
03_05_0379 + 23628200-23628366,23629074-23629133,23630177-236302... 50 3e-06
09_06_0261 - 21919017-21920594 39 0.006
09_04_0144 + 15071723-15071993,15072078-15072632,15072671-150726... 36 0.042
09_04_0717 + 19706160-19706327,19707036-19707157,19707408-197075... 35 0.073
04_04_0995 + 29985473-29985625,29986372-29986446,29986537-299870... 33 0.39
08_02_0872 + 22097087-22097961,22098083-22098155 32 0.68
08_02_1429 + 27040293-27040523,27041618-27041739,27042290-270423... 31 0.89
03_05_0513 - 25073518-25073623,25073719-25073777,25074048-250741... 31 1.2
03_05_0380 + 23636675-23636845,23637646-23637678,23637794-23638132 31 1.6
08_02_0873 + 22100124-22100810 30 2.1
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 30 2.1
04_04_0994 + 29980076-29980441,29980900-29980998,29981075-299816... 30 2.1
09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917 29 6.3
04_04_1086 - 30725010-30725138,30725748-30725786,30725876-307259... 29 6.3
>03_02_0275 +
7042433-7042732,7042864-7043140,7043751-7044231,
7044943-7045491,7045556-7045680,7045824-7045966
Length = 624
Score = 56.0 bits (129), Expect = 4e-08
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 562 SALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFV--LSHVTKPALRDR 735
S + CGH +CN+CW +F V+I +G S I+CMA C E V L + +P + +R
Sbjct: 181 SKMDCGHNYCNECWTGYFIVKINEGQSRRIKCMALKCNTICDEAIVRKLVNAKRPDIAER 240
Query: 736 YHXSCLKIML-ISPXLRFCPGPTVSGS 813
+ L+ + + +++CP G+
Sbjct: 241 FERFLLESYIEDNDTVKWCPSTPHCGN 267
>03_05_0377 +
23613181-23613342,23614469-23614501,23614606-23614879,
23615105-23615585,23616174-23616846
Length = 540
Score = 54.8 bits (126), Expect = 8e-08
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 562 SALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFV--LSHVTKPALRDR 735
S + CGH FCNDCW HF I G + IRCM C+ ED V L + PA R
Sbjct: 145 STMDCGHCFCNDCWTEHFFASINTG-NKQIRCMEVKCKAICDEDIVRRLLSLKYPAASKR 203
Query: 736 YHXSCLKIML-ISPXLRFCP 792
+ L+ L + +++CP
Sbjct: 204 FDLLLLESYLEDNDSVKWCP 223
>03_05_0379 +
23628200-23628366,23629074-23629133,23630177-23630209,
23630253-23630665,23631522-23632008,23632623-23633334
Length = 623
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/44 (47%), Positives = 23/44 (52%)
Frame = +1
Query: 562 SALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPED 693
S + CGH FCNDCW HF + G IRCMA C ED
Sbjct: 213 STMDCGHCFCNDCWTEHF-FACVNGGQKQIRCMAVGCAAVCDED 255
>09_06_0261 - 21919017-21920594
Length = 525
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 574 CGHYFCNDCWAMHFEVQIMQGV-SNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXSC 750
C H++C CW + + G ++RC +C + V V R+R+
Sbjct: 150 CSHFYCVSCWRGYVRAAVGDGARCLSLRCPDPSCPAAVVRELV-DAVADGEDRERFGWFA 208
Query: 751 LKIML-ISPXLRFCPGPTVSGSFE 819
L+ + S +R+CPGP S + E
Sbjct: 209 LRSYVEESAGMRWCPGPGCSRAVE 232
>09_04_0144 +
15071723-15071993,15072078-15072632,15072671-15072681,
15072954-15073012,15073962-15074040
Length = 324
Score = 35.9 bits (79), Expect = 0.042
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 556 KYSALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDR 735
+++ C H FCN C + +I + V+ I C CE E + P L DR
Sbjct: 122 QFTVSFCAHAFCNSCIGRYVAAKISENVA-VIGCPDPGCEEGFVEMDTCRDIIPPELFDR 180
Query: 736 YHXSCLKIMLISPXLRFCP 792
+ S ++ L +CP
Sbjct: 181 WSVSLCELAL-GEKKYYCP 198
>09_04_0717 +
19706160-19706327,19707036-19707157,19707408-19707510,
19707644-19707734,19707960-19708132,19708534-19708622,
19708995-19709085,19709272-19709361,19709807-19709854,
19710033-19710104,19710181-19710274,19710350-19710494,
19710809-19710951,19711601-19711751,19712276-19712449,
19712799-19712874
Length = 609
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 562 SALACGHYFCNDCWAMHFEVQIMQGVS-NTIRCMAQNCEVRAPEDFVLSHVTKPALRDRY 738
S C H++C++CW + + G ++C +C+ ED + S +TK + +Y
Sbjct: 147 SCAGCSHFYCHECWEGYISAAVNDGPGCLVLQCPEPSCDAIVLEDMINS-LTKDEDKVKY 205
>04_04_0995 +
29985473-29985625,29986372-29986446,29986537-29987044,
29987349-29987734,29988418-29988641,29988728-29988893,
29989095-29989226
Length = 547
Score = 32.7 bits (71), Expect = 0.39
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNC 672
L CGHYFC C + + + +G + C C
Sbjct: 252 LPCGHYFCQRCMETYSRMHVAEGTVLKLLCPNDKC 286
>08_02_0872 + 22097087-22097961,22098083-22098155
Length = 315
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/83 (20%), Positives = 38/83 (45%)
Frame = +1
Query: 544 PQLHKYSALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPA 723
P ++ C H FC C A + +I + +++ +RC + C A + + +
Sbjct: 121 PSAAHRASRGCDHAFCAACLAGYVGAKIQERIAD-VRCPEERCR-GALDPELCQGILPRE 178
Query: 724 LRDRYHXSCLKIMLISPXLRFCP 792
+ DR+ + + M+++ +CP
Sbjct: 179 VFDRWGAALCEAMVLAAPRAYCP 201
>08_02_1429 +
27040293-27040523,27041618-27041739,27042290-27042392,
27042530-27042620,27042851-27043023,27043379-27043467,
27044212-27044319,27044408-27044498,27044708-27044797,
27045587-27045658,27045756-27045849,27045940-27046087,
27046961-27047222
Length = 557
Score = 31.5 bits (68), Expect = 0.89
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 562 SALACGHYFCNDCWAMHFEVQIMQGVS-NTIRCMAQNC 672
S+ C H++C++CW + I G ++RC +C
Sbjct: 168 SSADCDHFYCHECWEGYISAAISDGPGCLSLRCPDPSC 205
>03_05_0513 -
25073518-25073623,25073719-25073777,25074048-25074185,
25074719-25074982,25075062-25075306,25075874-25076081
Length = 339
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 565 ALACGHYFCNDCWAMHFEVQIMQGVSN 645
AL+CGH FC C V I QGV +
Sbjct: 247 ALSCGHLFCKGCACGAASVYIFQGVKS 273
>03_05_0380 + 23636675-23636845,23637646-23637678,23637794-23638132
Length = 180
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 550 LHKYSALACGHYFCNDC 600
L SA+ CGH FCNDC
Sbjct: 156 LGSVSAMDCGHCFCNDC 172
>08_02_0873 + 22100124-22100810
Length = 228
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +1
Query: 547 QLHKYSALACGHYFCNDCWAMHFEVQIMQ-GVSNTIRCMAQNCEVRAPEDFVLSHVTKPA 723
+ H+ C H FC C A H ++ G + +RC +C + +
Sbjct: 41 EAHRGGGGGCAHAFCRACLAGHVRAKVESGGGAGAVRCPDPSCGGALDPELCRGALPGDV 100
Query: 724 LRDRYHXSCLKIMLISPXLRFCPGPTVS 807
+R+ + + M +CP P S
Sbjct: 101 F-ERWCAALCEAMFAGARRTYCPYPGCS 127
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 559 YSALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRY 738
+ L C HYFC C + + + +G + C C P +L + +R+
Sbjct: 171 FITLPCQHYFCRRCMETYSRMHVTEGTVLKLLCPNDKCGGIIPPS-LLKRLLGDTDFERW 229
Query: 739 HXSCLKIMLIS-PXLRFCP 792
L+ L S L +CP
Sbjct: 230 ERLILQKTLDSMSDLAYCP 248
>04_04_0994 +
29980076-29980441,29980900-29980998,29981075-29981612,
29982211-29982494,29983014-29983034,29983238-29983452,
29983538-29983691,29984089-29984220
Length = 602
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXS 747
L C H+FC C + ++ + +G + C C V P + +L + +R+
Sbjct: 341 LPCHHFFCLKCMQTYCKMHVKEGTVVKLLCPDTKCGVVVPPN-ILKRLLGEEEFERWEGL 399
Query: 748 CLKIMLIS-PXLRFCP 792
L+ L S + +CP
Sbjct: 400 LLRRTLDSMSDVVYCP 415
>09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917
Length = 328
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/73 (23%), Positives = 27/73 (36%)
Frame = +1
Query: 574 CGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXSCL 753
C H FC C + ++ V+ I C CE + E + P L R+ S
Sbjct: 136 CSHAFCKSCIGGYVAAKVSDNVA-AIGCPDPGCEEGSVEIGQCRDIVPPELFGRWSVSLW 194
Query: 754 KIMLISPXLRFCP 792
+ + +CP
Sbjct: 195 ESSMGETTKCYCP 207
>04_04_1086 -
30725010-30725138,30725748-30725786,30725876-30725998,
30726953-30727015,30727540-30727620,30727998-30728088,
30728295-30728366,30728452-30728552,30728681-30728779,
30729132-30729329,30730792-30730824,30731084-30731192,
30732088-30732149,30732388-30732468,30732549-30732704,
30732812-30732976,30733351-30733413,30733492-30733545,
30733574-30733612,30733727-30733783,30733862-30733930,
30734022-30734135,30734216-30734284,30734821-30734927,
30735207-30735363
Length = 776
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 660 HAAYCI*DSLHYLNFKMHC 604
HA I DSL+Y FK+HC
Sbjct: 640 HALMIIADSLYYTKFKLHC 658
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,827,909
Number of Sequences: 37544
Number of extensions: 304435
Number of successful extensions: 607
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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