Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_G07
         (860 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    75   5e-14
AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical ...    66   2e-11
AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical ...    62   4e-10
AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical ...    62   4e-10
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    58   6e-09
AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical...    55   6e-08
U13644-1|AAB52683.1|  437|Caenorhabditis elegans Hypothetical pr...    35   0.086
U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical pr...    34   0.15 
U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical pr...    34   0.15 
U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical pr...    34   0.15 
U13644-5|AAB52681.1|  451|Caenorhabditis elegans Hypothetical pr...    32   0.46 
U10402-5|AAA19066.2|  650|Caenorhabditis elegans Tryptophanyl (w...    29   4.3  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    29   5.6  

>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = +1

Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHV-TKPALRDRYHX 744
           L CGH FC  CW  H E ++ +GV++ I CM   CEV AP +FVLS +   P ++ +Y  
Sbjct: 143 LTCGHCFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKLKYER 202

Query: 745 SCLKIMLIS-PXLRFCPG 795
             L+ M+ S P L+FC G
Sbjct: 203 FLLRDMVNSHPHLKFCVG 220


>AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical
           protein C27A12.6 protein.
          Length = 491

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
 Frame = +1

Query: 388 RXALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTPQLHKYSA 567
           R  LH Y+WN + ++ ++ E+ + +      +                      + + S 
Sbjct: 79  RILLHKYKWNKESLLERFYEHPDTIAFLIDAQVIPRQQEVIPAGDAECDICC-SMDELSG 137

Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXS 747
           L+C H  C +CW  +   +I+    + I CMA NC++   ++ VLS+++ P +  +Y   
Sbjct: 138 LSCNHRACAECWQAYLTNKIVSDAQSEIECMAPNCKLLIEDEKVLSYISDPTMVSKYRKL 197

Query: 748 CL-KIMLISPXLRFCPG 795
            +   + I+  LR+CPG
Sbjct: 198 MVASYVEINCLLRWCPG 214


>AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical
           protein C27A12.7b protein.
          Length = 433

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
 Frame = +1

Query: 388 RXALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTPQLHKYSA 567
           R  LH Y+WN + ++ +  E+ + +      +                      + + S 
Sbjct: 20  RILLHKYKWNKESLLERLYEHPDTIAFLIDAQVIPRQQEVIPAGDAECDICC-SMDELSG 78

Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXS 747
           L+C H  C +CW  +   +I+    + I CMA NC++   ++ VL+++  P +  +Y   
Sbjct: 79  LSCNHRACAECWQAYLTNKIVSDAQSEIECMAPNCKLLIEDEKVLAYIKDPTIIAKYRKM 138

Query: 748 CLKIML-ISPXLRFCPG 795
            +   + I+  L++CPG
Sbjct: 139 MVASYIEINALLKWCPG 155


>AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical
           protein C27A12.7a protein.
          Length = 497

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
 Frame = +1

Query: 388 RXALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTPQLHKYSA 567
           R  LH Y+WN + ++ +  E+ + +      +                      + + S 
Sbjct: 84  RILLHKYKWNKESLLERLYEHPDTIAFLIDAQVIPRQQEVIPAGDAECDICC-SMDELSG 142

Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXS 747
           L+C H  C +CW  +   +I+    + I CMA NC++   ++ VL+++  P +  +Y   
Sbjct: 143 LSCNHRACAECWQAYLTNKIVSDAQSEIECMAPNCKLLIEDEKVLAYIKDPTIIAKYRKM 202

Query: 748 CLKIML-ISPXLRFCPG 795
            +   + I+  L++CPG
Sbjct: 203 MVASYIEINALLKWCPG 219


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
 Frame = +1

Query: 388 RXALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTPQLHKYSA 567
           R  LH Y+WN + ++ ++ E+  +   F                          L + S 
Sbjct: 81  RILLHKYKWNKESLLERFYEHP-DTTTFLIDAHVIPRRQERLPAGDAECDICCSLGELSG 139

Query: 568 LACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPALRDRYHXS 747
           L+C H  C  CW  +   +I     + I CMA NC++   ++ V+ ++T P +   Y   
Sbjct: 140 LSCNHRACTQCWKAYLTNKIANNAQSEIECMAPNCKLLIEDEKVMFYITDPTVIATYRKL 199

Query: 748 CL-KIMLISPXLRFCPG 795
            +   +  +  L++CPG
Sbjct: 200 IVASYVETNRLLKWCPG 216


>AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical
           protein Y73F8A.34a protein.
          Length = 485

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 32/145 (22%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
 Frame = +1

Query: 388 RXALHAYEWNAQEIINKYKENAN--EVLVFSRVKXXXXXXXXXXXXXXXXXXXTPQ---- 549
           R  LH ++WN   +++K+ E+++  E L  ++V                      +    
Sbjct: 69  RILLHKFKWNKDRLLDKFYEHSDTTEFLAEAQVIPKTSSSEEAAGSSAPPPGGDAECDVC 128

Query: 550 --LHKYSALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFVLSHVTKPA 723
             + + S LAC H  C++CW  +   +I+    + I CM  +C++   ++ V+S++T P 
Sbjct: 129 CSMTRLSGLACAHRACDECWKAYLTEKIVDVGQSEIECMMMDCKLLIEDEKVMSYITDPF 188

Query: 724 LRDRYHXSCLKIML-ISPXLRFCPG 795
           +   Y    +   +  +  L++CPG
Sbjct: 189 VIAAYRKLIISSYVETNSQLKWCPG 213


>U13644-1|AAB52683.1|  437|Caenorhabditis elegans Hypothetical
           protein F56D2.5 protein.
          Length = 437

 Score = 34.7 bits (76), Expect = 0.086
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 CGHYFCNDCWAMHFEVQIMQG-VSNTIRCMAQNCEVRAPEDFV 699
           C H FC  C   ++ + I +G VS  + C+A+ CE  A +  V
Sbjct: 202 CSHVFCKSC-TFNYYISIAKGFVSKPMSCLAEGCENEAQQGMV 243


>U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical
           protein F25B5.6c protein.
          Length = 484

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 379 HSPRXALHAYEWNAQEIINKYKENANEVLVF 471
           H+P+      EW A+EI+N  KEN  ++L+F
Sbjct: 334 HTPKSMEACSEWAAEEIVNLKKENVKKILLF 364


>U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical
           protein F25B5.6a protein.
          Length = 510

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 379 HSPRXALHAYEWNAQEIINKYKENANEVLVF 471
           H+P+      EW A+EI+N  KEN  ++L+F
Sbjct: 360 HTPKSMEACSEWAAEEIVNLKKENVKKILLF 390


>U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical
           protein F25B5.6b protein.
          Length = 521

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 379 HSPRXALHAYEWNAQEIINKYKENANEVLVF 471
           H+P+      EW A+EI+N  KEN  ++L+F
Sbjct: 371 HTPKSMEACSEWAAEEIVNLKKENVKKILLF 401


>U13644-5|AAB52681.1|  451|Caenorhabditis elegans Hypothetical
           protein F56D2.2 protein.
          Length = 451

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 574 CGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEVRAPEDFV 699
           C H FC  C   ++       VS  ++C+A+ C+  A ++ V
Sbjct: 204 CSHVFCKQCTFDYYRTISKGVVSKAMQCLAEGCKSEAQQNTV 245


>U10402-5|AAA19066.2|  650|Caenorhabditis elegans Tryptophanyl (w)
           trna synthetaseprotein 2, isoform a protein.
          Length = 650

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +1

Query: 562 SALACGHYFCNDCWAMHFEVQIMQGVSNTIRCMAQNCEV--RAPEDF-VLSHVTKPAL 726
           SAL CGH FC  C   H         +++ RC     E   R P +  +LS  T P +
Sbjct: 265 SALFCGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPRDPNNLRLLSTSTHPTI 322


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +2

Query: 413  GMLKK*LTNIKKMQMKCWFSVG*SHKCLHKVYQADQVVLF 532
            G L+K L + KKM+++CW S+     C ++  Q  Q+V F
Sbjct: 2937 GELRKLLVDWKKMEVRCWSSL--LINCENEAKQRAQLVAF 2974


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,308,264
Number of Sequences: 27780
Number of extensions: 303572
Number of successful extensions: 754
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)