Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_G04
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15188-7|AAA27951.1|  161|Caenorhabditis elegans Ribosomal prote...   185   4e-47
Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical...    30   1.9  
U00047-4|AAA50690.1|  825|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical pr...    29   5.9  
U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in bl...    29   5.9  
U64859-8|AAC69096.1|  378|Caenorhabditis elegans Prion-like-(q/n...    29   5.9  
Z92775-2|CAB07162.2|  382|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z92775-1|CAB07161.2|  379|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>L15188-7|AAA27951.1|  161|Caenorhabditis elegans Ribosomal protein,
           large subunitprotein 21 protein.
          Length = 161

 Score =  185 bits (450), Expect = 4e-47
 Identities = 89/148 (60%), Positives = 109/148 (73%), Gaps = 2/148 (1%)
 Frame = +3

Query: 168 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 347
           +FAR FR HG   LSTY   YK GD+VDI+ NGA QKGMP K YHG+TGR++NVT  A+G
Sbjct: 14  MFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVG 73

Query: 348 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKSV-NLKRQP 524
           +IVNKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+   K AK+AG+ V  LKR P
Sbjct: 74  IIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLP 133

Query: 525 APPKAAH-IVSGTEKPVLLAPIPYEFVA 605
             P+ AH + +   +P LLAP+ +E VA
Sbjct: 134 VAPRGAHTVTTQNNEPELLAPLRFEIVA 161


>Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical
           protein W06F12.2c protein.
          Length = 502

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 313 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 176
           PVFP Y+  G+P    PLP     +P     M V+  + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271


>Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical
           protein W06F12.2b protein.
          Length = 568

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 313 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 176
           PVFP Y+  G+P    PLP     +P     M V+  + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271


>Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical
           protein W06F12.2a protein.
          Length = 562

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 313 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 176
           PVFP Y+  G+P    PLP     +P     M V+  + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265


>AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.1 protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 230 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 367
           Q  RHC  Q   C S  Y      W+ RSRV    +C+  +  Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411


>U00047-4|AAA50690.1|  825|Caenorhabditis elegans Hypothetical
           protein ZK418.6 protein.
          Length = 825

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 507 NLKRQPAPPKAAHIVSGTE 563
           NL+R+PAPPK  H+ S  E
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480


>Z46267-9|CAA86427.2|  889|Caenorhabditis elegans Hypothetical
           protein F49E2.5d protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +3

Query: 405 VEHVKHSKCRQDFLKRVKENERLLKEAKAAGKSVNLKRQP-----APPKAAHIVSGTEKP 569
           VE+V  +   +       EN++  K+ K   +S  +  QP     APP+   +V   EKP
Sbjct: 357 VENVVENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVEKVEKP 416

Query: 570 VLLAPI 587
           V  AP+
Sbjct: 417 V--APV 420


>U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 9 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/68 (29%), Positives = 26/68 (38%)
 Frame = +2

Query: 323 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQE 502
           Q  CSC +    Q+CS +      Q P  +C   Q Q     + Q    A    Q CRQ+
Sbjct: 34  QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91

Query: 503 RQPEETAS 526
            Q     S
Sbjct: 92  CQSAPAVS 99


>U64859-8|AAC69096.1|  378|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 57
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 20/68 (29%), Positives = 26/68 (38%)
 Frame = +2

Query: 323 QRDCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQE 502
           Q  CSC +    Q+CS +      Q P  +C   Q Q     + Q    A    Q CRQ+
Sbjct: 34  QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91

Query: 503 RQPEETAS 526
            Q     S
Sbjct: 92  CQSAPAVS 99


>Z92775-2|CAB07162.2|  382|Caenorhabditis elegans Hypothetical
           protein C06H5.2 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 467 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 312
           LILFD+LK VL ++GVL   +  I+ L     A  L   +TE +    + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251


>Z92775-1|CAB07161.2|  379|Caenorhabditis elegans Hypothetical
           protein C06H5.1 protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 467 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 312
           LILFD+LK VL ++GVL   +  I+ L     A  L   +TE +    + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,966,800
Number of Sequences: 27780
Number of extensions: 349536
Number of successful extensions: 1104
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)