Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_G02
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal ...    30   9.5  
AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal...    30   9.5  
AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal ...    30   9.5  
AJ314900-1|CAC85747.1|  551|Homo sapiens obscurin protein.             30   9.5  
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.             30   9.5  

>AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal
            calmodulin and titin-interacting RhoGEF protein.
          Length = 6620

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 214  MSLKKSGASRRTIAPWA-RADAGEENYELGGHDVLSRDLSAEEMRTWTANTEECVHN 47
            + ++  G +RR + P A +ADAGE + E GG  V S  L   E +   A  E+ VHN
Sbjct: 1120 VGMEVKGCTRRLVLPQAGKADAGEYSCEAGGQRV-SFHLHITEPKGVFAK-EQSVHN 1174


>AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal
            calmodulin and titin-interacting RhoGEF protein.
          Length = 6620

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 214  MSLKKSGASRRTIAPWA-RADAGEENYELGGHDVLSRDLSAEEMRTWTANTEECVHN 47
            + ++  G +RR + P A +ADAGE + E GG  V S  L   E +   A  E+ VHN
Sbjct: 1120 VGMEVKGCTRRLVLPQAGKADAGEYSCEAGGQRV-SFHLHITEPKGVFAK-EQSVHN 1174


>AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal
            calmodulin and titin-interacting RhoGEF protein.
          Length = 6620

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 214  MSLKKSGASRRTIAPWA-RADAGEENYELGGHDVLSRDLSAEEMRTWTANTEECVHN 47
            + ++  G +RR + P A +ADAGE + E GG  V S  L   E +   A  E+ VHN
Sbjct: 1120 VGMEVKGCTRRLVLPQAGKADAGEYSCEAGGQRV-SFHLHITEPKGVFAK-EQSVHN 1174


>AJ314900-1|CAC85747.1|  551|Homo sapiens obscurin protein.
          Length = 551

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 214 MSLKKSGASRRTIAPWA-RADAGEENYELGGHDVLSRDLSAEEMRTWTANTEECVHN 47
           + ++  G +RR + P A +ADAGE + E GG  V S  L   E +   A  E+ VHN
Sbjct: 143 VGMEVKGCTRRLVLPQAGKADAGEYSCEAGGQRV-SFHLHITEPKGVFAK-EQSVHN 197


>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
          Length = 6620

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 214  MSLKKSGASRRTIAPWA-RADAGEENYELGGHDVLSRDLSAEEMRTWTANTEECVHN 47
            + ++  G +RR + P A +ADAGE + E GG  V S  L   E +   A  E+ VHN
Sbjct: 1120 VGMEVKGCTRRLVLPQAGKADAGEYSCEAGGQRV-SFHLHITEPKGVFAK-EQSVHN 1174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,463,764
Number of Sequences: 237096
Number of extensions: 1381555
Number of successful extensions: 3949
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3949
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)