Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_G01
         (940 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   5.3  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   5.3  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   5.3  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   5.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   5.3  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   5.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   5.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   7.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   7.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   7.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   7.0  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   9.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   9.2  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   9.2  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   9.2  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 112 IPVPVPVYYGNFPPRPMGSW 131


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 112 IPVPVPVYYGNFPPRPMGSW 131


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 112 IPVPVPVYYGNFPPRPMGSW 131


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 112 IPVPVPVYYGNFPPRPMGSW 131


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 112 IPVPVPVYYGNFPPRPMGSW 131


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 112 IPVPVPVYYGNFPPRPMGSW 131


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +1

Query: 760 PRGXFXXSPGXXPPXXPPPXGPPPXFP 840
           P+     +P   PP   PP  PP   P
Sbjct: 34  PQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +PI V  +YG  P + +  W
Sbjct: 117 IPIPVPVYYGNFPPRPMGPW 136


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +PI V  +YG  P + +  W
Sbjct: 122 IPIPVPVYYGNFPPRPMGPW 141


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +PI V  +YG  P + +  W
Sbjct: 122 IPIPVPVYYGNFPPRPMGPW 141


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +PI V  +YG  P + +  W
Sbjct: 122 IPIPVPVYYGNFPPRPMGPW 141


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 127 IPVPVPVYYGNFPPRPMGPW 146


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 127 IPVPVPVYYGNFPPRPMGPW 146


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 127 IPVPVPVYYGNFPPRPMGPW 146


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 6   LPITVXRFYGTLPXKTLNCW 65
           +P+ V  +YG  P + +  W
Sbjct: 352 IPVPVPVYYGNFPPRPMGPW 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,600
Number of Sequences: 438
Number of extensions: 8746
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)