Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F24
         (974 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.21 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    28   0.37 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   0.64 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   3.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.5  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 29.1 bits (62), Expect = 0.21
 Identities = 28/106 (26%), Positives = 29/106 (27%)
 Frame = +1

Query: 607 KRGXGPXGXP*XPGXPPPPKGXXFPQXXXAPQTPGRGKKXNPXXFXPPGXVPPXXXPPGX 786
           +R  GP   P      PPP           P  P  G    P    PPG V     PP  
Sbjct: 148 QRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNV----GPPRT 203

Query: 787 XTLSXSXAXPXNXSPPXPXXXPXXGEGGXAXWXPPXXVXAXPGXNP 924
            T       P    PP P        G      P     A PG  P
Sbjct: 204 GT-------PTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQP 242



 Score = 25.4 bits (53), Expect = 2.6
 Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
 Frame = +3

Query: 837 PXXXXPXXGGGPRLLXPPXX---GFXXTXXXPSXXPPGXLXPXPPRCP 971
           P    P    GP+++ PP         T   P    PG + P PP  P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVP 225


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -1

Query: 710 PGVWGAXXXWGKXXPFGGGGXPGXXGXPXGPXP 612
           PGV GA    G+    G  G PG  G P  P P
Sbjct: 168 PGVPGAPGLAGRDGCNGTDGLPGLSGLPGNPGP 200


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 0.64
 Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
 Frame = -1

Query: 716 PRPGVWGAXXXWGKXXPFGGGGXPGXXGXPXGP-XPLFSXXGGXPRXXPXGXPG 558
           PR G+ G     G   P G  G PG  G P  P  P      G P     G PG
Sbjct: 55  PR-GLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGPPG 107



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
 Frame = +1

Query: 556 PPGYPXGXX-RGXPPXX-EKRGXGPXGXP*XPGXPPPPKGXXFPQXXXAPQTPG------ 711
           PPG P     RG      EK   GP G P  PG    P     P        PG      
Sbjct: 46  PPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGP 105

Query: 712 RGKKXNPXXFXPPG 753
            G K NP    P G
Sbjct: 106 PGPKGNPGLRGPKG 119



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 25/77 (32%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
 Frame = +1

Query: 556 PPGYPXGXXRGXPPXXEKRGXGPXGXP*XPGXPPPPKGXXFPQXXXAPQTPGR-GKKXNP 732
           PPG P G      P  E+ G G  G P  PG    P           P  PG  G K  P
Sbjct: 105 PPG-PKGNPGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKGEP 163

Query: 733 XXFXPPGXVPPXXXPPG 783
               P G  P     PG
Sbjct: 164 GPKGPAGH-PGAPGRPG 179



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
 Frame = -1

Query: 710 PGVWGAXXXWGKXXPFGGGGXPGXXGXPXGPXP-----LFSXXGGXPRXXPXGXPGGXPX 546
           PG+ G     G+    G  G  G  G P  P P     L    G      P G PG    
Sbjct: 20  PGIQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAPGR 79

Query: 545 XXVP 534
             +P
Sbjct: 80  DGMP 83


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -2

Query: 661 GGXVPXGXXGXXXGPXPFFXXGGG 590
           GG  P G  G   GP P    GGG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGG 231


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 11/30 (36%), Positives = 12/30 (40%)
 Frame = -1

Query: 662  GGGGXPGXXGXPXGPXPLFSXXGGXPRXXP 573
            G GG PG    P    P  +  GG P   P
Sbjct: 3215 GAGGVPGVAVVPGSGLPAAAASGGAPSAMP 3244


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/43 (30%), Positives = 13/43 (30%)
 Frame = +1

Query: 622 PXGXP*XPGXPPPPKGXXFPQXXXAPQTPGRGKKXNPXXFXPP 750
           P G P  P   PPP     P     P     G    P    PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.151    0.532 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,483
Number of Sequences: 2352
Number of extensions: 12501
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106474641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)