Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F23
(873 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 67 6e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 4e-07
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 51 4e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 42 0.020
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 39 0.19
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 4.1
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 66.9 bits (156), Expect = 6e-10
Identities = 40/88 (45%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 554 TSITKIDAQVRGGXTRQDYKDTRRXPLEAXPXRSPVPTLPXTXXXSAFPXXXAWRF-SXX 730
TSITKIDAQVRGG TRQDYKDTRR PLEA F AWRF
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 731 PX*VSXFGVGXPPQXGLCAXPPXXPTXA 814
+S P +C PP PT A
Sbjct: 84 AVGISVRCRSFAPSWAVCTNPPFSPTAA 111
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 38/59 (64%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = -2
Query: 551 RGAEPMXKRPATRPFYGSW--PFAGLLLTXSFLRYPLILWITVLPPLSELIPLAAAERP 381
RGAEPM KR W P LLT SF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKR------LRCWLLPVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 57.6 bits (133), Expect = 4e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 294 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGIXQ 461
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 56.4 bits (130), Expect = 9e-07
Identities = 44/121 (36%), Positives = 55/121 (45%)
Frame = +3
Query: 318 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGIXQERXCEQKASKRP 497
R +C G +PLPRSLTR ARSFGCGERY+LT + R K RP
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD------GDGNFLEDTRKTLSKEEIRP 79
Query: 498 GTVKRPRCWAFXHRLRPPXRASQKSTLKSEVAKPDRTIKIPGVXPWKLPRCALLFRPCRL 677
+R R ++ P + KS + + + K P P P CALLF P L
Sbjct: 80 ---RRSR-FSIG---SAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGL 132
Query: 678 P 680
P
Sbjct: 133 P 133
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = +2
Query: 554 TSITKIDAQVRGGXTRQDYKDTRRXPLEA 640
TSI K DAQ+ GG TRQDYKD RR PL A
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVA 120
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +2
Query: 554 TSITKIDAQVRGGXTRQDYKDTRRXPLEA 640
TSITK DAQ+ GG TRQDYKDTRR PL A
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAA 88
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 97 DPDMIRYIDEFGQTTTRMQ 153
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.9 bits (94), Expect = 0.020
Identities = 28/65 (43%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 637 SXPXALSCSDPAXYRXXVX-LSPSGSVALFIXPXVGXPXRCWXSPPXWAVCXT-PLXXXR 810
S P ALSCS+PA R V S +GSVAL G RC P WAV P
Sbjct: 41 SLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTA 100
Query: 811 CPXPV 825
P PV
Sbjct: 101 APYPV 105
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 292 SALMNRPTRGERRFAYW 342
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 364 ERGSGRAPNTQTASPRALADSLMQ 293
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +2
Query: 413 HSKAVIRLSTESGDXAGKXM 472
HSKAVIRLSTESGD AGK M
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 503 GSWPFAGLLLTXSFLRYP---LILWITVLPPLSELIPLAAAERP 381
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 175 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 342
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 255 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 91
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.5
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 210 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 49
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,326,630
Number of Sequences: 1657284
Number of extensions: 11833025
Number of successful extensions: 25585
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 24796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25577
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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