Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F21
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0926 + 12448032-12448231,12448727-12448815,12449956-124500... 102 3e-22
10_08_0180 + 15502809-15503312,15503399-15503454,15503934-155040... 98 1e-20
03_01_0359 - 2805094-2805175,2805256-2805347,2805443-2805517,280... 87 2e-17
03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 43 4e-04
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 31 0.94
11_04_0168 + 14391244-14391325,14392132-14392155,14392256-143923... 31 1.6
06_01_0931 + 7192519-7194075 31 1.6
05_01_0192 + 1394342-1396645 30 2.2
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 30 2.9
07_03_1107 - 24024387-24024497,24025799-24026410 29 5.0
11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604 29 6.7
>03_02_0926 +
12448032-12448231,12448727-12448815,12449956-12450096,
12450181-12450283,12450386-12450481,12450580-12450654,
12450754-12450823,12451028-12451111
Length = 285
Score = 102 bits (245), Expect = 3e-22
Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 10/146 (6%)
Frame = +3
Query: 324 SISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSI----GG 491
S S+ +S+ +T + I VNAAN R+ GGGVDGAIHR AGP L C + G
Sbjct: 108 SNSDYLSMTMKKMTVIHISQ-VNAANERMLGGGGVDGAIHRTAGPELVEACRKVPEVKSG 166
Query: 492 --CPTGDAKVTGGYNLPAKYIIHTVGP---QDGSAE-KLESCYEKCLSYXQEYQIKSIAX 653
CPTG+A++T + LP +IHTVGP D E L + Y L ++ I+ IA
Sbjct: 167 VRCPTGEARITPAFKLPVSRVIHTVGPIYDMDKQPEVSLNNAYTNSLKLAKQNGIQYIAL 226
Query: 654 PCISTGIYGFPNRLAAHIALRTARKF 731
P IS G+Y +P + A+ IA+ TA++F
Sbjct: 227 PAISCGVYRYPPKEASKIAVSTAQRF 252
>10_08_0180 +
15502809-15503312,15503399-15503454,15503934-15504053,
15504190-15504260,15504603-15504696,15504772-15504978,
15505406-15505657,15505781-15505889,15506112-15506179,
15506278-15506347,15506429-15506503,15506600-15506691,
15506779-15506860
Length = 599
Score = 97.9 bits (233), Expect = 1e-20
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 6/106 (5%)
Frame = +3
Query: 438 IHRAAGPFLQAECDSIGGCPTGDAKVTGGYNLPAKYIIHTVGPQ------DGSAEKLESC 599
+H AAG L EC ++GGC TG AK+T Y+LPA+ +IHTVGP+ + L C
Sbjct: 153 LHAAAGSGLAEECSTLGGCRTGMAKMTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHC 212
Query: 600 YEKCLSYXQEYQIKSIAXPCISTGIYGFPNRLAAHIALRTARKFLE 737
Y CL E ++SIA CI T +P AAH+A+RT R+FLE
Sbjct: 213 YRSCLELLIENGLESIAMGCIYTEAKNYPREPAAHVAIRTVRRFLE 258
>03_01_0359 -
2805094-2805175,2805256-2805347,2805443-2805517,
2805582-2805675,2805769-2805872,2806777-2806885,
2807397-2807609,2808170-2808289,2809060-2809115,
2809210-2809287,2809374-2809733
Length = 460
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 6/102 (5%)
Frame = +3
Query: 327 ISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSIGGCPTGD 506
I+ ++ +++G LE+DA+VN+ N L G +H AAGP L EC ++GGC TG
Sbjct: 95 INSKICLWRGHPWNLEVDAVVNSTNENLDEAHSSPG-LHAAAGPGLAEECTTLGGCRTGM 153
Query: 507 AKVTGGYNLPAKYIIHTVGPQ------DGSAEKLESCYEKCL 614
AK+T Y+LPA+ +IHTVGP+ + L CY CL
Sbjct: 154 AKMTNAYDLPARKVIHTVGPKYAVKYHTAAENALSHCYRSCL 195
>03_02_0651 +
10183050-10184167,10184350-10184974,10185023-10185208,
10185325-10185660
Length = 754
Score = 42.7 bits (96), Expect = 4e-04
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +3
Query: 297 IKINTEKNKSISERVSIFKGDITKLE------IDAIVNAANSRLK-AGGGVDGAIHRAAG 455
+K K S R F GDIT+L+ + I NAAN RLK GGGV+ AI+ AAG
Sbjct: 332 VKEKAAKKNINSSRFFTFVGDITQLQSKGGLRCNVIANAANWRLKPGGGGVNAAIYNAAG 391
Query: 456 PFLQ 467
LQ
Sbjct: 392 EDLQ 395
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 31.5 bits (68), Expect = 0.94
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Frame = -1
Query: 523 PPVTLASPVGHPPIESHSACKKGPAARCMAPSTP---PPAFSLELAAFTI--ASISSLVM 359
PP P HPP H + P AP P PP + FT A++S +M
Sbjct: 227 PPSPHRHPAAHPPPPPHHPAPRPPPPMAAAPRQPAALPPVPGATVVPFTTMQAAVSRNMM 286
Query: 358 SPLKIET 338
L + T
Sbjct: 287 ESLSVPT 293
>11_04_0168 +
14391244-14391325,14392132-14392155,14392256-14392381,
14392491-14392832,14392955-14393070,14393166-14393426,
14393875-14394072,14394177-14394254
Length = 408
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 SKKSTTDDLKEFEKIKINTEKNKSISERVSIFKG--DITKLEIDAIVNAANSRLKAGGGV 428
SKKS D+ + + +++ NK E ++ + G +K EI+ +N ANS++ G G
Sbjct: 61 SKKSKADETIDSTR---SSQDNKVHGEVINRWSGLYKFSKGEIEKAINYANSKICLGSGS 117
Query: 429 DGAIHRAAGP 458
G +++ P
Sbjct: 118 AGQVYQGVLP 127
>06_01_0931 + 7192519-7194075
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -1
Query: 592 SSFSADPSWGPTVWMIYLAGKL*PPVTLASPVGHPPIESHS-ACKKGPAARCMAPSTPPP 416
SSF+ADP P ++ ++G L +A PV PP ++ AC + C A + PP
Sbjct: 25 SSFTADP---PAEFLCPISGTL-----MADPVVVPPGQTFERACIQA----CAALAFSPP 72
Query: 415 AFSLELAAFTIASISSLVMSP 353
A + +L++ ++ S LV+ P
Sbjct: 73 AVAADLSSLPPSASSPLVLVP 93
>05_01_0192 + 1394342-1396645
Length = 767
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 487 PIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSP 353
P S S+ K P+ R PS+PPP + AA AS++ ++ SP
Sbjct: 247 PTSSSSSPSK-PSPRMATPSSPPPEAPVSSAAPPPASLNPMLPSP 290
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Frame = -1
Query: 673 IPVDI-HGKAIDFIWYSXWYDR 611
+PVD+ HG ++DF+W S +DR
Sbjct: 443 VPVDLNHGFSVDFVWKSTSFDR 464
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = -1
Query: 514 TLASPVGHPPIESHSACKKGPAARCMAPSTPPPAFSLELAAFTIASISSLVMSPLKIETR 335
T +P PP +S A P A A +TPPPA S + A + S +P I T+
Sbjct: 79 TTPAPTKAPPTKSTKAPAPAPKA---AKATPPPASSPPVEAPVASPPSPAAEAPATIPTK 135
Query: 334 SE 329
+
Sbjct: 136 PD 137
>11_03_0035 - 9130678-9130887,9130963-9131255,9132328-9132604
Length = 259
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 490 PPIESHSACKKGPAARCMAPSTPPPAFSLELA 395
PP + HS KG AP+ PP LEL+
Sbjct: 139 PPFKKHSIFFKGLFGTAPAPAPAPPLLELELS 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,315,542
Number of Sequences: 37544
Number of extensions: 356704
Number of successful extensions: 1380
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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