Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F19
         (1001 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.70 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   2.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   6.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   6.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   8.6  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 792 GGGXGGGXXGXGGGGG 745
           GGG GGG  G  G GG
Sbjct: 92  GGGRGGGRDGDRGDGG 107


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 745 PPPPPPP 765
           PPPPPPP
Sbjct: 731 PPPPPPP 737


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 181 FFFFXXXFFFFF 146
           F+FF   FF+FF
Sbjct: 239 FYFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 181 FFFFXXXFFFFF 146
           F+FF   FF+FF
Sbjct: 235 FYFFISTFFYFF 246


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 801 KXGGGGXGGGXXGXGGG 751
           K GGGG G G     GG
Sbjct: 523 KGGGGGSGSGNNQPPGG 539


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,865
Number of Sequences: 336
Number of extensions: 2685
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28547508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)