Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F18
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    32   0.019
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.97 
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   3.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 32.3 bits (70), Expect = 0.019
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 264 GGGAGFRSNRSGGVQRGRNRGG 329
           GGG G R  R GG  RGR RGG
Sbjct: 66  GGGRGGRGGRGGGRGRGRGRGG 87



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +3

Query: 219 GGAGRKFDANKRTGRGGGAGFRSNRSGG 302
           GG GR     +  GRG G G R  R GG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRG-RGGRDGG 91


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 0.97
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = +3

Query: 213 IGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 383
           +GGGA         +G GGGAG      GG+  G   GG     ++  G   +   H
Sbjct: 671 LGGGA-----VGGGSGAGGGAGSSGGSGGGLASGSPYGGGGHHLSHHHGGAAAATGH 722



 Score = 25.8 bits (54), Expect = 1.7
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 216  GGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDM 389
            GGG     D +   G GGG   G     SGG   G + GG +  T+   G  +ST + D 
Sbjct: 824  GGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTS---GGGSSTTRRDH 880

Query: 390  FNDFGERKLQRNSGTITT 443
              D+    +Q  +GT  T
Sbjct: 881  NIDYSSLFIQL-TGTFPT 897



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGI 332
           GG  G +++   R G G G G      GG   GR  GG+
Sbjct: 540 GGSDGPEYEGAGRGGVGSGIGGGGGGGGG---GRAGGGV 575



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 189 IKANKKTRIGGGAGRK--FDANKRTGRGGGAGFRSNRSGGVQRGRNRGGI 332
           +  N     GGG G     + ++  G GG AG  S+  G    G  RGG+
Sbjct: 508 VVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSD--GPEYEGAGRGGV 555


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 246 NKRTGRGGGAGFRSNRSGGVQRGRNRGGI 332
           +++T  GGG G  +  SGG   G + G +
Sbjct: 243 SQQTSNGGGTGGGTGGSGGAGSGGSSGNL 271


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = +3

Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGD 362
           GGG GR  D   R     G G      GG+Q       I       RG+
Sbjct: 228 GGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRGNAIPSMVVDRRGE 276



 Score = 23.8 bits (49), Expect = 6.8
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
 Frame = +3

Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQR--GRNRGG 329
           GGG G         G GGG   R +R    +R  G N GG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 36   PLRFDFLSPSTW 71
            P  FDF SP TW
Sbjct: 2823 PRNFDFSSPGTW 2834


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 36   PLRFDFLSPSTW 71
            P +FD+ SP TW
Sbjct: 2833 PTKFDYSSPGTW 2844


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,227
Number of Sequences: 2352
Number of extensions: 14381
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)