Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F18
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 131 4e-30
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 103 1e-21
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 42 0.004
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 42 0.004
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 42 0.004
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 42 0.004
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 42 0.004
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 42 0.004
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 37 0.082
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 37 0.082
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 37 0.082
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 37 0.082
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 37 0.082
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 37 0.082
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 37 0.082
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 37 0.082
BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein. 37 0.11
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 36 0.14
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 36 0.19
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 36 0.19
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 36 0.19
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 36 0.25
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 36 0.25
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 36 0.25
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 36 0.25
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 36 0.25
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 36 0.25
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 36 0.25
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 36 0.25
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 36 0.25
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 36 0.25
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 36 0.25
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 36 0.25
BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.33
BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.33
AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator av... 35 0.33
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.44
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.44
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 35 0.44
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.44
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 35 0.44
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.58
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.58
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.58
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 34 0.58
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.58
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.58
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.58
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 34 0.58
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.58
BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.58
BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein. 34 0.58
AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.58
AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein pr... 34 0.58
AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2 p... 34 0.58
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 34 0.76
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 34 0.76
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 34 0.76
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 33 1.0
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 33 1.3
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 33 1.3
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 33 1.3
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 33 1.3
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 33 1.3
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 33 1.3
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 33 1.8
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 33 1.8
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 33 1.8
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 33 1.8
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.8
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 33 1.8
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 33 1.8
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 33 1.8
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 33 1.8
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 33 1.8
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 33 1.8
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 32 2.3
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 32 2.3
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 32 2.3
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 32 2.3
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 32 2.3
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 32 2.3
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 32 3.1
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 32 3.1
S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein p... 32 3.1
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 32 3.1
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 32 3.1
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 32 3.1
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 32 3.1
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 32 3.1
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 32 3.1
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 32 3.1
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 32 3.1
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 32 3.1
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 32 3.1
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 32 3.1
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 32 3.1
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 32 3.1
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 32 3.1
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 4.1
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 4.1
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 4.1
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 4.1
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 4.1
Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA seque... 31 7.1
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 31 7.1
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 31 7.1
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 31 7.1
DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein. 31 7.1
CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein. 31 7.1
CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein. 31 7.1
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 31 7.1
BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directe... 31 7.1
BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directe... 31 7.1
BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directe... 31 7.1
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 31 7.1
BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain ... 31 7.1
BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain ... 31 7.1
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 31 7.1
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 31 7.1
BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein. 31 7.1
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 31 7.1
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 31 7.1
AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46... 31 7.1
AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein pr... 31 7.1
AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein pr... 31 7.1
AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens ... 31 7.1
AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein... 31 7.1
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 31 7.1
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 31 7.1
AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein. 31 7.1
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 30 9.4
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 30 9.4
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 30 9.4
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 30 9.4
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 30 9.4
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 30 9.4
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 30 9.4
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 30 9.4
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 131 bits (316), Expect = 4e-30
Identities = 84/163 (51%), Positives = 100/163 (61%), Gaps = 13/163 (7%)
Frame = +3
Query: 153 MVDQIEMALDDIIKANKKTRIGGGAGR-KFDANKRTGRGGGA--GFRSNRSGGVQRGR-- 317
M D+++M+LDDIIK N+ R G G GR + A + GRGGGA R NR GG R R
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA 60
Query: 318 ------NRGGITKSTNYSRG-DVNSTWKHDMFND-FGERKLQRNSGTITTGPTKLLVSXL 473
GG + YSR + W+HD+F+ FG +G T G KLLVS L
Sbjct: 61 IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGG-----GAGVETGG--KLLVSNL 113
Query: 474 DFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
DFGVSD+DI ELF EFG LK A+VHYDRSGRSLGTADV FE+K
Sbjct: 114 DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERK 156
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 103 bits (246), Expect = 1e-21
Identities = 71/139 (51%), Positives = 81/139 (58%), Gaps = 12/139 (8%)
Frame = +3
Query: 222 GAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGR--------NRGGITKSTNYSRG-DVN 368
G GR A R GR GGA R NR GG R R GG + YSR +
Sbjct: 4 GRGR---AGSRAGRRGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRPAPYSRPKQLP 60
Query: 369 STWKHDMFND-FGERKLQRNSGTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASV 545
W+HD+F+ FG +G T G KLLVS LDFGVSD+DI ELF EFG LK A+V
Sbjct: 61 DKWQHDLFDSGFGG-----GAGVETGG--KLLVSNLDFGVSDADIQELFAEFGTLKKAAV 113
Query: 546 HYDRSGRSLGTADVVFEKK 602
HYDRSGRSLGTA+V FE+K
Sbjct: 114 HYDRSGRSLGTANVHFERK 132
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T P ++ V +DF ++SD+ + F ++G +K + DR+G S G V FE
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFE 81
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T P ++ V +DF ++SD+ + F ++G +K + DR+G S G V FE
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFE 87
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T P ++ V +DF ++SD+ + F ++G +K + DR+G S G V FE
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFE 87
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T P ++ V +DF ++SD+ + F ++G +K + DR+G S G V FE
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFE 81
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T P ++ V +DF ++SD+ + F ++G +K + DR+G S G V FE
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFE 81
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T P ++ V +DF ++SD+ + F ++G +K + DR+G S G V FE
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFE 81
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 31 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 73
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 37.1 bits (82), Expect = 0.082
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 329
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 6 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 44
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/48 (43%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG GR R GRGGG G GG GR GG N RG
Sbjct: 28 GGGRGRGGGFRGR-GRGGGGG----GGGGGGGGRGGGGFHSGGNRGRG 70
>BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.11
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 162 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 341
+IE D +N + RIG +GR + + GR GG R +R G + G + G +S
Sbjct: 349 EIEEYYDGNTSSNSRQRIGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 407
Query: 342 TNYSR 356
N +R
Sbjct: 408 GNRNR 412
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 36.3 bits (80), Expect = 0.14
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGR----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 383
GGG G++ + GR GGG+G NRS G R RGG RG + +
Sbjct: 208 GGGYGQQDRGGRGRGRSSGGGGGSGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DR 262
Query: 384 DMFNDFG---ERKLQRNSGTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
FN FG ++ + +S + + V L V+ + + F + GI+K+
Sbjct: 263 GGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 316
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 392 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 446
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
G G G + ++G GGG G+ GG RGR+ GG
Sbjct: 191 GSGGGGGYGNQDQSG-GGGGGYGQQDRGGRGRGRSSGG 227
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 338
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 210 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 317
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 329
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein family A
member 1 protein.
Length = 199
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 338
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGDNFRGGGRGGFGRGGGRGGFNK 60
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGR 317
GGG G + GRGGG GFR R GG RGR
Sbjct: 170 GGGRG-----GRGGGRGGGGGFRGGRGGGF-RGR 197
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.19
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 338
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 210 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 317
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 329
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 437
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFEK 599
T L V L ++ D+ E+F +G L +V YD R+GRS G A V FE+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 169
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 437
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 437
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFEK 599
T L V L ++ D+ E+F +G L +V YD R+GRS G A V FE+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 169
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 437
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LDF V + E+F G +K A + D+ G+S G V FE+
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 282
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFEK 599
T L V L ++ D+ E+F +G L +V YD R+GRS G A V FE+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 169
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFEK 599
T L V L ++ D+ E+F +G L +V YD R+GRS G A V FE+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFER 169
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 35.5 bits (78), Expect = 0.25
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LDF V + E+F G +K A + D+ G+S G V FE+
Sbjct: 255 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQ 302
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 437
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L GVS + E F + GI+K+
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 259
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 437
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 438 TTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L GVS + E F + GI+K+
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKT 262
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator aven
protein.
Length = 362
Score = 35.1 bits (77), Expect = 0.33
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRG 359
GGG G D R GRG G GFR R G G RG + + G
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAG 85
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1491 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1539
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.44
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 192 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 326
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LDF V + E+F G +K+ S D+ G+S G V FE+
Sbjct: 182 IFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKSRGMGTVTFEQ 229
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 79 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 137
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 138 DFGNYNNQSSN 148
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 50 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 108
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 109 DFGNYNNQSSN 119
>BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 50 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 108
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 109 DFGNYNNQSSN 119
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 181 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 239
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 240 DFGNYNNQSSN 250
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.58
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG + G GG N D ++ +N
Sbjct: 203 GGGRGGGFGGNDNFGRGGNFSGRGG-FGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 162 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 341
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 342 TNYSR 356
N +R
Sbjct: 722 GNRNR 726
>BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein.
Length = 467
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 162 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 341
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 393 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 451
Query: 342 TNYSR 356
N +R
Sbjct: 452 GNRNR 456
>AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 162 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 341
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 342 TNYSR 356
N +R
Sbjct: 722 GNRNR 726
>AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein
protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 162 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 341
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 325 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 383
Query: 342 TNYSR 356
N +R
Sbjct: 384 GNRNR 388
>AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2
protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.58
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 162 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 341
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 342 TNYSR 356
N +R
Sbjct: 722 GNRNR 726
>X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion
protein.
Length = 462
Score = 33.9 bits (74), Expect = 0.76
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNY 350
GGG R + GRGGG G R G + G N+ G+ K Y
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVY 273
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein.
Length = 462
Score = 33.9 bits (74), Expect = 0.76
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNY 350
GGG R + GRGGG G R G + G N+ G+ K Y
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVY 273
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 33.9 bits (74), Expect = 0.76
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +3
Query: 231 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGER 410
R+ + R+G G+G + + R R+ ++S +YSR D H + R
Sbjct: 12 RESRSASRSGSAHGSGKSARHTPAKSRSRSHRR-SRSRSYSR-DYRRRHSHS-HSPMSTR 68
Query: 411 KLQRNSGTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADV 587
+ + L V L ++ D+ E+F ++G + S+ YD +S RS G A V
Sbjct: 69 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 128
Query: 588 VFE 596
FE
Sbjct: 129 YFE 131
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 378 KHDMFNDFGERKLQRNSGTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDR 557
K D + R +Q+ +G + G T + V+ LD+ V + E+F G++ A + D+
Sbjct: 145 KEDPDGEHARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 558 SGRSLGTADVVFEK 599
G+S G V FE+
Sbjct: 201 DGKSRGIGTVTFEQ 214
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T + V + + D + ELF E+G +S V D SG+S G V +E
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T + V + + D + ELF E+G +S V D SG+S G V +E
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 83
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T + V + + D + ELF E+G +S V D SG+S G V +E
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T + V + + D + ELF E+G +S V D SG+S G V +E
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 232
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFE 596
T + V + + D + ELF E+G +S V D SG+S G V +E
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYE 247
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +3
Query: 378 KHDMFNDFGERKLQRNSGTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDR 557
K D + R +Q+ +G + G T + V+ LD+ V + E+F G++ A + D+
Sbjct: 145 KEDPDGECARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 558 SGRSLGTADVVFEK 599
G+S G V FE+
Sbjct: 201 DGKSRGIGTVTFEQ 214
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 312
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 228 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 265
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG G GG N D ++ +N
Sbjct: 203 GGGRGDGFGGNDNFGRGGNFSGRGG-FGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GGG G F N GRGG R GG G GG N D ++ +N
Sbjct: 203 GGGRGDGFGGNDNFGRGGNFSGRGG-FGGSCGGGGYGGSGDGYNGFGNDGSNFGGGGSYN 261
Query: 396 DFGERKLQRNS 428
DFG Q ++
Sbjct: 262 DFGNYNNQSSN 272
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 312
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 228 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 265
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 32.7 bits (71), Expect = 1.8
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 258 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 428
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 429 GTITTGPTKLLVSXLDFGVSDSDIXELFXEFGILKS 536
+ + V L V+ + + F + GI+K+
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKT 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LD+ V + E+F G++ A + D+ G+S G V FE+
Sbjct: 46 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQ 93
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LD+ V + E+F G++ A + D+ G+S G V FE+
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQ 252
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LD+ V + E+F G++ A + D+ G+S G V FE+
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQ 253
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LD+ V + E+F G++ A + D+ G+S G V FE+
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQ 253
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 456 LLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
+ V+ LD+ V + E+F G++ A + D+ G+S G V FE+
Sbjct: 106 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQ 153
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 386
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 163 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 217
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein
protein.
Length = 195
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 329
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 103 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 140
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 51
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + V D + ELF +FG S V D +G+S G V +EK
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEK 240
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + V L V + + +LF +FG + S V D SG S V FEK
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEK 240
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + V L V + + +LF +FG + S V D SG S V FEK
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEK 240
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + V L V + + +LF +FG + S V D SG S V FEK
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEK 240
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + V L V + + +LF +FG + S V D SG S V FEK
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEK 240
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 396 DFGERKLQRNS 428
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 396 DFGERKLQRNS 428
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein.
Length = 189
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 85 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 141
Query: 396 DFGERKLQRNS 428
DFG Q+ S
Sbjct: 142 DFGNYSGQQQS 152
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 396 DFGERKLQRNS 428
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 216 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFN 395
GG G + R G GGG N+ GG G G + N+ G+ +N
Sbjct: 274 GGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGYDGYNEGGNFGGGNYGGGGN---YN 330
Query: 396 DFGERKLQRNS 428
DFG Q+ S
Sbjct: 331 DFGNYSGQQQS 341
>Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA sequence
from clone RP1-222E13 on chromosome 22. ).
Length = 421
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 324
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + + D + +LF +FG S V D SG+S G V FE+
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER 215
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + + D + +LF +FG S V D SG+S G V FE+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER 240
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 308
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 309 RGR--NRGG 329
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein.
Length = 163
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 22 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 66
>CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 329
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 330 ITKSTNYSRGDV 365
K++ RG V
Sbjct: 80 FGKTSLNHRGRV 91
>CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 324
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 308
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 309 RGR--NRGG 329
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 324
>BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 392
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 251 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 295
>BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 324
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + + D + +LF +FG S V D SG+S G V FE+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER 240
>BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain
containing 1 protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 329
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 330 ITKSTNYSRGDV 365
K++ RG V
Sbjct: 80 FGKTSLNRRGRV 91
>BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain
containing 1 protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 329
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 330 ITKSTNYSRGDV 365
K++ RG V
Sbjct: 80 FGKTSLNHRGRV 91
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + + D + +LF +FG S V D SG+S G V FE+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER 240
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEK 599
T + + + D + +LF +FG S V D SG+S G V FE+
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER 240
>BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein.
Length = 417
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 276 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 320
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 308
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 309 RGR--NRGG 329
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 308
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 309 RGR--NRGG 329
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46
protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 324
>AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 251 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 295
>AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein
protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 324
>AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ14766 fis, clone NT2RP3004041. ).
Length = 318
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 329
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 330 ITKSTNYSRGDV 365
K++ RG V
Sbjct: 80 FGKTSLNHRGRV 91
>AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein
protein.
Length = 318
Score = 30.7 bits (66), Expect = 7.1
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRGG 329
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q+ G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQQ---NSG 79
Query: 330 ITKSTNYSRGDV 365
K++ RG V
Sbjct: 80 FGKTSLNRRGRV 91
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 308
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 309 RGR--NRGG 329
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 YLEFQIITMVDQIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQ 308
++ F+ I MA++ ++ R+ AG+ D R RGG AG R GG
Sbjct: 51 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQ-AGKSSDNRSRGYRGGSAGGRGFFRGGRG 109
Query: 309 RGR--NRGG 329
RGR +RGG
Sbjct: 110 RGRGFSRGG 118
>AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein.
Length = 424
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +3
Query: 450 TKLLVSXLDFGVSDSDIXELFXEFGILKSASVHYDRSGRSLGTADVVFEKK 602
TK+ V+ L V++ DI ELF G LK A + + G A+VVF KK
Sbjct: 283 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKK 327
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 67
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 30.3 bits (65), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 462 VSXLDFGVSDSDIXELFXEFGILKSASVHYD-RSGRSLGTADVVFE 596
V L ++ D+ E+F ++G + S+ YD +S RS G A V FE
Sbjct: 110 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,460,911
Number of Sequences: 237096
Number of extensions: 2108813
Number of successful extensions: 5859
Number of sequences better than 10.0: 161
Number of HSP's better than 10.0 without gapping: 4146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5431
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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