Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F16
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    59   3e-09
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/...    38   0.012
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/...    38   0.012
AF016428-3|AAO26000.3|  445|Caenorhabditis elegans Ground-like (...    35   0.064
AF022976-7|AAC69086.1|  441|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z48055-10|CAA88135.1|  573|Caenorhabditis elegans Hypothetical p...    28   9.6  
Z36282-3|CAA85289.1|  573|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 34/113 (30%), Positives = 59/113 (52%)
 Frame = +2

Query: 56   RYLPPDTGVRPYSRSQAEGYKMLFELEKGKYVTTDTYEAHVWVIPAKEVVVCTDKRILYL 235
            R L  D  V+PYS   A G+K+  + ++G+   TD +  +   I  K V++ TD+R++  
Sbjct: 3053 RVLREDKIVKPYSSGDAYGFKVFKDTDRGELAETDEFVTYA-SISEKMVLIITDRRLVLS 3111

Query: 236  EKNNVFGGWQIVWTYLWTELPEVPSPVNKGVYIPTAKKKVLGMFSSSGSGKVI 394
            ++ ++ G WQ  W   + ++ E P  +  GV I   +KK   +   S  GK+I
Sbjct: 3112 KRTDMMGVWQTEWGSEYCKIKE-PEFIPNGVKILLKEKKKGFLGIGSSEGKII 3163


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 34/113 (30%), Positives = 59/113 (52%)
 Frame = +2

Query: 56   RYLPPDTGVRPYSRSQAEGYKMLFELEKGKYVTTDTYEAHVWVIPAKEVVVCTDKRILYL 235
            R L  D  V+PYS   A G+K+  + ++G+   TD +  +   I  K V++ TD+R++  
Sbjct: 3080 RVLREDKIVKPYSSGDAYGFKVFKDTDRGELAETDEFVTYA-SISEKMVLIITDRRLVLS 3138

Query: 236  EKNNVFGGWQIVWTYLWTELPEVPSPVNKGVYIPTAKKKVLGMFSSSGSGKVI 394
            ++ ++ G WQ  W   + ++ E P  +  GV I   +KK   +   S  GK+I
Sbjct: 3139 KRTDMMGVWQTEWGSEYCKIKE-PEFIPNGVKILLKEKKKGFLGIGSSEGKII 3190


>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 2, isoform
           c protein.
          Length = 1510

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -3

Query: 287 SIGKSRRSANPRTRYSSPNTKFFCRCRPPPPWLGSPTRELRTCP*SRIYPSRVRTTFYNL 108
           S   +RR  +     S PN K      PPPP  G P+  L+T P   + P  +  T+YNL
Sbjct: 529 SSSSTRRELSSTHTNSVPNLKSH-ETPPPPPPKGHPSVHLQT-PYQHVQPQMIPATYYNL 586

Query: 107 RPE 99
            P+
Sbjct: 587 PPQ 589


>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 2, isoform
           a protein.
          Length = 1507

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -3

Query: 287 SIGKSRRSANPRTRYSSPNTKFFCRCRPPPPWLGSPTRELRTCP*SRIYPSRVRTTFYNL 108
           S   +RR  +     S PN K      PPPP  G P+  L+T P   + P  +  T+YNL
Sbjct: 529 SSSSTRRELSSTHTNSVPNLKSH-ETPPPPPPKGHPSVHLQT-PYQHVQPQMIPATYYNL 586

Query: 107 RPE 99
            P+
Sbjct: 587 PPQ 589


>AF016428-3|AAO26000.3|  445|Caenorhabditis elegans Ground-like (grd
           related) protein18 protein.
          Length = 445

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -3

Query: 242 SSPNTKFFCRCRPPPPWLGSPTRELRTCP*SRIYPS 135
           SSP  +  C C PP P    PT+   T P S IYPS
Sbjct: 40  SSPPAQLGCLCPPPMPCYQQPTQNYYTQPPSVIYPS 75


>AF022976-7|AAC69086.1|  441|Caenorhabditis elegans Hypothetical
           protein R11G11.12 protein.
          Length = 441

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 196 LGWDHPHVSFVRVRSHVFTLLEFEQHFITFGL 101
           L + HP +SF++    + TL+E +  F+ F L
Sbjct: 374 LEFSHPEISFIQKLQPILTLIEEDAFFVNFAL 405


>Z70755-3|CAA94782.1|  475|Caenorhabditis elegans Hypothetical
           protein K06A4.3 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 168 KLTCG*SQPRRWWSAPTKEFCIWRRITCSGVGRSSGLTYGPNCRK 302
           K++ G      +W   T++  +W+    SG  + S ++ G N RK
Sbjct: 232 KVSKGKDDDDNYWKRLTEQITLWKVSDASGAAKVSMVSQGENIRK 276


>Z48055-10|CAA88135.1|  573|Caenorhabditis elegans Hypothetical
           protein K10G9.1 protein.
          Length = 573

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = +2

Query: 131 LEKGKYVTTDTYEAHVWVIPAKEVVVCTDKRILYLEKNNVFGGWQIVWTYLWTELPEVPS 310
           LE+ K  TT    A V V+              +     VFG   IVW+ LW  +    S
Sbjct: 186 LERSKLATTTFTGASVGVMVGLPASAYLVSHFSWSTPFYVFGALGIVWSILWIYVSGT-S 244

Query: 311 PVNKGVYIPTAKKKVL 358
           P   G YI   +KK +
Sbjct: 245 PETHG-YISADEKKYI 259


>Z36282-3|CAA85289.1|  573|Caenorhabditis elegans Hypothetical
           protein K10G9.1 protein.
          Length = 573

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 23/76 (30%), Positives = 30/76 (39%)
 Frame = +2

Query: 131 LEKGKYVTTDTYEAHVWVIPAKEVVVCTDKRILYLEKNNVFGGWQIVWTYLWTELPEVPS 310
           LE+ K  TT    A V V+              +     VFG   IVW+ LW  +    S
Sbjct: 186 LERSKLATTTFTGASVGVMVGLPASAYLVSHFSWSTPFYVFGALGIVWSILWIYVSGT-S 244

Query: 311 PVNKGVYIPTAKKKVL 358
           P   G YI   +KK +
Sbjct: 245 PETHG-YISADEKKYI 259


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,912,392
Number of Sequences: 27780
Number of extensions: 363279
Number of successful extensions: 862
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)