Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F16
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    27   0.17 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    25   0.88 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = -1

Query: 295 QFGP*VSPDDLPTPEHVILLQIQNSFVGADHHLLGWDHPHVSFVRVRSHV 146
           +FG  V P  LP  +H +     +SF G+D  +LGW   H SF  + SH+
Sbjct: 268 KFGDKVGPACLPF-QHFL-----DSFAGSDVTVLGWG--HTSFNGMLSHI 309


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 14/51 (27%), Positives = 17/51 (33%)
 Frame = -1

Query: 271 DDLPTPEHVILLQIQNSFVGADHHLLGWDHPHVSFVRVRSHVFTLLEFEQH 119
           +D     H  LL    S  G  HH +G  H H+       H        QH
Sbjct: 394 EDNALASHNNLLNNVYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQH 444


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -1

Query: 271 DDLPTPEHVILLQIQNSFVGADHHLLGWDHP-HVSFVRVRSHVFTLLEFEQHFITFGLRS 95
           D+ P P+H+++    N  +   ++  G D P + +F++  S      +F++    +    
Sbjct: 275 DEFPQPKHMLIEAYTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLIDNW---M 331

Query: 94  RVRPHSGIGRQVPG 53
              P SGI   VPG
Sbjct: 332 TYMPPSGIPNWVPG 345


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -1

Query: 271 DDLPTPEHVILLQIQNSFVGADHHLLGWDHP-HVSFVRVRSHVFTLLEFEQHFITFGLRS 95
           D+ P P+H+++    N  +   ++  G D P + +F++  S      +F++    +    
Sbjct: 275 DEFPQPKHMLIEAYTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLVDNW---M 331

Query: 94  RVRPHSGIGRQVPG 53
              P SGI   VPG
Sbjct: 332 TYMPPSGIPNWVPG 345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,488
Number of Sequences: 438
Number of extensions: 4688
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)