Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F15
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 88 5e-17
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 88 5e-17
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 88 5e-17
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 88 5e-17
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 88 5e-17
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 88 5e-17
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 88 5e-17
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 35 0.35
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 35 0.35
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 35 0.35
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 35 0.35
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 35 0.35
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 35 0.35
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.35
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.35
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 35 0.35
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 35 0.35
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 35 0.35
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 35 0.35
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 35 0.35
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 35 0.35
BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance ... 35 0.46
AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein. 35 0.46
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 34 0.61
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 34 0.61
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 34 0.61
AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein. 34 0.61
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 34 0.80
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 34 0.80
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.80
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 34 0.80
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 34 0.80
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 34 0.80
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.80
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 34 0.80
BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. 34 0.80
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 34 0.80
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.80
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 34 0.80
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 34 0.80
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 34 0.80
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 34 0.80
AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens ... 34 0.80
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 34 0.80
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 33 1.1
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 33 1.4
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 33 1.4
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 33 1.4
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 33 1.4
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 33 1.4
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 33 1.4
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 33 1.4
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 33 1.4
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 33 1.4
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 33 1.8
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 33 1.8
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 33 1.8
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 33 1.8
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 33 1.8
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 33 1.8
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 33 1.8
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 33 1.8
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 33 1.8
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 33 1.8
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 33 1.8
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 33 1.8
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 33 1.8
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 33 1.8
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 32 2.4
L13744-1|AAA58361.1| 568|Homo sapiens AF-9 protein. 32 2.4
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 32 2.4
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 32 2.4
D16688-1|BAA04090.1| 342|Homo sapiens LTG9/MLLT3 protein protein. 32 2.4
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 32 2.4
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 32 2.4
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 32 2.4
BC036089-1|AAH36089.1| 568|Homo sapiens myeloid/lymphoid or mix... 32 2.4
AL512635-1|CAH70705.1| 568|Homo sapiens myeloid/lymphoid or mix... 32 2.4
AL354879-1|CAI14771.1| 568|Homo sapiens myeloid/lymphoid or mix... 32 2.4
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 32 2.4
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 32 2.4
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 32 3.2
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 31 4.3
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 31 4.3
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 31 4.3
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 30 9.9
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 221 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 252
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 221 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 252
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 221 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 252
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 221 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 252
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 138 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 197
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 198 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 229
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 84 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 143
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 144 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 175
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 87.8 bits (208), Expect = 5e-17
Identities = 48/102 (47%), Positives = 61/102 (59%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T++HIGRLT NVT+DHI EIFSTYG +K I+ P++R+HPH +GYAYVE + +
Sbjct: 161 TKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKAL 220
Query: 765 STWTGXQIDGQRYGGACAGSVTXGQXVASTXTPRXGPRRHSP 890
G QIDGQ +T +A PR PRR SP
Sbjct: 221 KHMDGGQIDGQ--------EITATAVLA--PWPRPPPRRFSP 252
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 173 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 218
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 162 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 207
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 92 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 137
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 95 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 140
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 175 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 220
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 164 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 209
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 35.1 bits (77), Expect = 0.35
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG+ ++
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGFCFI 228
>BC039828-1|AAH39828.1| 1091|Homo sapiens structural maintenance of
chromosomes 6 protein.
Length = 1091
Score = 34.7 bits (76), Expect = 0.46
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 373 VQGLRKKQFHQTRVHLKIVVMLIGRRLEIDHQQETKKNLCYLYQMTKLKLRKNRNDLQDV 552
+ L + ++T L + L +I H +E K Y+ K+K+RKN ++++++
Sbjct: 668 ISDLENEVENKTAQILNLQQHLSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIREL 727
Query: 553 RSENAHHHHDQLVSTLDD 606
EN H ++TL+D
Sbjct: 728 --ENIEEHQSVDIATLED 743
>AC097377-2|AAX88851.1| 1091|Homo sapiens unknown protein.
Length = 1091
Score = 34.7 bits (76), Expect = 0.46
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 373 VQGLRKKQFHQTRVHLKIVVMLIGRRLEIDHQQETKKNLCYLYQMTKLKLRKNRNDLQDV 552
+ L + ++T L + L +I H +E K Y+ K+K+RKN ++++++
Sbjct: 668 ISDLENEVENKTAQILNLQQHLSALEKDIKHNEELLKRCQLHYKELKMKIRKNISEIREL 727
Query: 553 RSENAHHHHDQLVSTLDD 606
EN H ++TL+D
Sbjct: 728 --ENIEEHQSVDIATLED 743
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 34.3 bits (75), Expect = 0.61
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T + + L N+T+D + +FS+ G V+S + D++ H+ GY +V + +
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS-LGYGFVNYVTAKDAERAI 78
Query: 765 STWTGXQIDGQ 797
+T G ++ +
Sbjct: 79 NTLNGLRLQSK 89
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 34.3 bits (75), Expect = 0.61
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T + + L N+T+D + +FS+ G V+S + D++ H+ GY +V + +
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS-LGYGFVNYVTAKDAERAI 78
Query: 765 STWTGXQIDGQ 797
+T G ++ +
Sbjct: 79 NTLNGLRLQSK 89
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 34.3 bits (75), Expect = 0.61
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML* 764
T + + L N+T+D + +FS+ G V+S + D++ H+ GY +V + +
Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHS-LGYGFVNYVTAKDAERAI 78
Query: 765 STWTGXQIDGQ 797
+T G ++ +
Sbjct: 79 NTLNGLRLQSK 89
>AJ310551-1|CAC39248.1| 1091|Homo sapiens SMC6 protein protein.
Length = 1091
Score = 34.3 bits (75), Expect = 0.61
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +1
Query: 454 EIDHQQETKKNLCYLYQMTKLKLRKNRNDLQDVRSENAHHHHDQLVSTLDD 606
+I H +E K Y+ K+K+RKN ++++++ EN H ++TL+D
Sbjct: 695 DIKHNEELLKRCQLHYKELKMKIRKNISEIREL--ENIEEHQSVDIATLED 743
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 98
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 98
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 103
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 103
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein.
Length = 179
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 98
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 103
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 591 IHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVE 731
+ + RL L D + E+FS YG ++ + D L +GYA++E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRD-LVTGFSKGYAFIE 103
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ36307 fis, clone THYMU2004906, moderately
similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 186
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 33.9 bits (74), Expect = 0.80
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
T + + LT + D + +F YG V + P DR + RG+A+V
Sbjct: 14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDR-YTKESRGFAFV 60
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
+I +G L+ + + I E F +G V+SIE PMD + RG ++
Sbjct: 162 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN-KTNKRRGLCFI 207
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 183
Query: 786 IDGQR 800
+DG+R
Sbjct: 184 LDGRR 188
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 183
Query: 786 IDGQR 800
+DG+R
Sbjct: 184 LDGRR 188
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 183
Query: 786 IDGQR 800
+DG+R
Sbjct: 184 LDGRR 188
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 183
Query: 786 IDGQR 800
+DG+R
Sbjct: 184 LDGRR 188
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 183
Query: 786 IDGQR 800
+DG+R
Sbjct: 184 LDGRR 188
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 89 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 147
Query: 786 IDGQR 800
+DG+R
Sbjct: 148 LDGRR 152
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 25 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 83
Query: 786 IDGQR 800
+DG+R
Sbjct: 84 LDGRR 88
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 183
Query: 786 IDGQR 800
+DG+R
Sbjct: 184 LDGRR 188
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 33.1 bits (72), Expect = 1.4
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 113 LSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKEAKERANGME 171
Query: 786 IDGQR 800
+DG+R
Sbjct: 172 LDGRR 176
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 126 LSLYTTERDLREVFSRYGPLSGVNVVYDQ-RTGRSRGFAFVYFERIDDSKEAMERANGME 184
Query: 786 IDGQR 800
+DG+R
Sbjct: 185 LDGRR 189
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*S 767
++ +G L+ + + ++FS YG + + DR RG+ +V + K
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMM 65
Query: 768 TWTGXQIDGQR 800
G +DG++
Sbjct: 66 AMNGKSVDGRQ 76
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*S 767
++ +G L+ + + ++FS YG + + DR RG+ +V + K
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMM 65
Query: 768 TWTGXQIDGQR 800
G +DG++
Sbjct: 66 AMNGKSVDGRQ 76
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 405 NKSPLKDR-RDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 530
+KSP K R + +R K R RS + DK+K +K ++KEK
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEK 277
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 405 NKSPLKDR-RDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 530
+KSP K R + +R K R RS + DK+K +K ++KEK
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEK 277
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 126 LSLYTTERDLREVFSRYGPLSGVNVVYDQ-RTGRSRGFAFVYFERIDDSKEAMERANGME 184
Query: 786 IDGQR 800
+DG+R
Sbjct: 185 LDGRR 189
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*S 767
++ +G L+ + + ++FS YG + + DR RG+ +V + K
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMM 65
Query: 768 TWTGXQIDGQR 800
G +DG++
Sbjct: 66 AMNGKSVDGRQ 76
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*S 767
++ +G L+ + + ++FS YG + + DR RG+ +V + K
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMM 65
Query: 768 TWTGXQIDGQR 800
G +DG++
Sbjct: 66 AMNGKSVDGRQ 76
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 405 NKSPLKDR-RDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 530
+KSP K R + +R K R RS + DK+K +K ++KEK
Sbjct: 235 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEK 277
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*S 767
++ +G L+ + + ++FS YG + + DR RG+ +V + K
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMM 65
Query: 768 TWTGXQIDGQR 800
G +DG++
Sbjct: 66 AMNGKSVDGRQ 76
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 126 LSLYTTERDLREVFSRYGPLSGVNVVYDQ-RTGRSRGFAFVYFERIDDSKEAMERANGME 184
Query: 786 IDGQR 800
+DG+R
Sbjct: 185 LDGRR 189
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*S 767
++ +G L+ + + ++FS YG + + DR RG+ +V + K
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMM 65
Query: 768 TWTGXQIDGQR 800
G +DG++
Sbjct: 66 AMNGKSVDGRQ 76
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 32.7 bits (71), Expect = 1.8
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 405 NKSPLKDR-RDADREKIRDRSPTGDKKKSVLPLSNDKAKIKEK 530
+KSP K R + +R K R RS + DK+K +K ++KEK
Sbjct: 26 SKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEK 68
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 32.7 bits (71), Expect = 1.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 606 LTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQ 785
L+L T + E+FS YG + + D+ RG+A+V + K G +
Sbjct: 126 LSLYTTERDLREVFSRYGPLSGVNVVYDQ-RTGRSRGFAFVYFERIDDSKEAMERANGME 184
Query: 786 IDGQR 800
+DG+R
Sbjct: 185 LDGRR 189
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>L13744-1|AAA58361.1| 568|Homo sapiens AF-9 protein.
Length = 568
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 393 TISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSND 509
T S +K +KD+ K++ S T +KKKS LP +D
Sbjct: 319 TCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDD 357
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>D16688-1|BAA04090.1| 342|Homo sapiens LTG9/MLLT3 protein protein.
Length = 342
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 393 TISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSND 509
T S +K +KD+ K++ S T +KKKS LP +D
Sbjct: 93 TCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDD 131
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>BC036089-1|AAH36089.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 393 TISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSND 509
T S +K +KD+ K++ S T +KKKS LP +D
Sbjct: 319 TCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDD 357
>AL512635-1|CAH70705.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 393 TISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSND 509
T S +K +KD+ K++ S T +KKKS LP +D
Sbjct: 319 TCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDD 357
>AL354879-1|CAI14771.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 32.3 bits (70), Expect = 2.4
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 393 TISPNKSPLKDRRDADREKIRDRSPTGDKKKSVLPLSND 509
T S +K +KD+ K++ S T +KKKS LP +D
Sbjct: 319 TCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDD 357
>AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein
protein.
Length = 295
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 32.3 bits (70), Expect = 2.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTEDMTEDELREFFSQYGDVMDVFIP 223
>AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein
variant protein.
Length = 414
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFP 683
++ +GR T ++T D + E FS YG V + P
Sbjct: 192 KVFVGRCTGDMTEDELREFFSQYGDVMDVFIP 223
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.5 bits (68), Expect = 4.3
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
R+ + L T + + ++FS YG + + +P+D L +G+A++
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFI 448
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELI 737
++I + + I E+FST+G +K++ P RG+ +V+ +
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 882
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.5 bits (68), Expect = 4.3
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
R+ + L T + + ++FS YG + + +P+D L +G+A++
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFI 448
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELI 737
++I + + I E+FST+G +K++ P RG+ +V+ +
Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 882
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 31.5 bits (68), Expect = 4.3
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +3
Query: 588 RIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYV 728
R+ + L T + + ++FS YG + + +P+D L +G+A++
Sbjct: 416 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSL-TKKPKGFAFI 461
Score = 30.7 bits (66), Expect = 7.5
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +3
Query: 585 TRIHIGRLTLNVTRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELI 737
++I + + I E+FST+G +K++ P RG+ +V+ +
Sbjct: 845 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFL 895
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 30.3 bits (65), Expect = 9.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 621 TRDHIHEIFSTYGTVKSIEFPMDRLHPHNGRGYAYVELIMLMKQKML*STWTGXQIDGQ 797
T + IH+ F+ YG +K+I +DR + +GY VE + + + G + GQ
Sbjct: 85 TEEDIHDKFAEYGEIKNIHLNLDRRTGYL-KGYTLVEYETYKEAQAVMEGLNGQDLMGQ 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,259,545
Number of Sequences: 237096
Number of extensions: 1759234
Number of successful extensions: 4177
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 3652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4064
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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