Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F14
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-40|AAF59577.4|  967|Caenorhabditis elegans Hypothetical...    35   0.090
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    33   0.36 
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    33   0.36 
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    32   0.63 
AC199158-7|ABO33284.1|  217|Caenorhabditis elegans Hypothetical ...    29   4.5  
AC199158-3|ABO33287.1|  217|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>AC024817-40|AAF59577.4|  967|Caenorhabditis elegans Hypothetical
           protein Y54G2A.21 protein.
          Length = 967

 Score = 34.7 bits (76), Expect = 0.090
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +1

Query: 163 YSVILIXVLCFFINKTQKCSAESQAHFVASARRLHLSSTGRRRMQSN 303
           YSV L    CF I KT+K + ++  + + SA   + ++TG+ +++S+
Sbjct: 594 YSVTLDNTTCFPILKTRKATLKNAVNLIKSAEEKYQAATGKMKLESH 640


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = +1

Query: 211 QKCSAESQAHFVASARRLHLSSTGRRRMQSNLPPRR----HRKPPTL*KTRSRRRASLLV 378
           +K  +ES    +A +     S++  R  +S LP R     +  PPT  +   R   S   
Sbjct: 66  RKHPSESGNSSIADSEDPSESTSSSRPRRSRLPKRYFDDGYSPPPTKKRAAQRETPSDAE 125

Query: 379 EPRNPPTMLLAQLPMQSTPQSTPSTRNFRRCRLQQERLRTPPTKPXL 519
           E      + + ++ ++STP STP+ ++  + R + ++  TPP +  L
Sbjct: 126 EVE----VKIEEISVRSTPASTPAPKSTSKARGRPKKNPTPPRRKSL 168


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = +1

Query: 211 QKCSAESQAHFVASARRLHLSSTGRRRMQSNLPPRR----HRKPPTL*KTRSRRRASLLV 378
           +K  +ES    +A +     S++  R  +S LP R     +  PPT  +   R   S   
Sbjct: 66  RKHPSESGNSSIADSEDPSESTSSSRPRRSRLPKRYFDDGYSPPPTKKRAAQRETPSDAE 125

Query: 379 EPRNPPTMLLAQLPMQSTPQSTPSTRNFRRCRLQQERLRTPPTKPXL 519
           E      + + ++ ++STP STP+ ++  + R + ++  TPP +  L
Sbjct: 126 EVE----VKIEEISVRSTPASTPAPKSTSKARGRPKKNPTPPRRKSL 168


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = +1

Query: 211 QKCSAESQAHFVASARRLHLSSTGRRRMQSNLPPRR----HRKPPTL*KTRSRRRASLLV 378
           +K  +ES    +A +     S++  R  +S LP R     +  PPT  +   R   S   
Sbjct: 66  RKHPSESGNSSIADSEDPSESTSSSRPRRSRLPKRYFDDGYSPPPTKKRAAQRETPSDAE 125

Query: 379 EPRNPPTMLLAQLPMQSTPQSTPSTRNFRRCRLQQERLRTPPTKPXL 519
           E      + + ++ ++STP STP+ ++  + R + ++  TPP +  L
Sbjct: 126 EVE----VKIEEISVRSTPASTPAPKSTSKARGRPKKNPTPPRRKSL 168


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 325  KPPT-L*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQSTPSTRNFRRCRLQQERLRTP 501
            KPP+ L KT S + AS + E  +   +  A +   STP+    TR     + +Q+  +TP
Sbjct: 2897 KPPSALSKTESLKEASNIQESASTTRVQPALVVSHSTPEPVQLTRMAAAKKSEQKEYKTP 2956

Query: 502  PTKP 513
              KP
Sbjct: 2957 VAKP 2960


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +1

Query: 274 STGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVE-PRNPPTMLLAQLPMQSTPQSTPS 450
           S  RRR  S  P RR R PP    +RSR       +  R+PP    A+     +   +P 
Sbjct: 116 SPPRRRRISRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPP---AKRRRDQSRSKSPP 172

Query: 451 TRNFRRCRLQQERLRTPPTK 510
            RN+R    Q++R  +PP +
Sbjct: 173 RRNYR----QRQRSGSPPVR 188


>AC199158-7|ABO33284.1|  217|Caenorhabditis elegans Hypothetical
           protein AC8.11 protein.
          Length = 217

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 271 SSTGRRRMQSNLPPRRH-RKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQST 444
           SS   +++Q N P + H R+P     TRS++R S    P  P   ++ Q  ++++P ST
Sbjct: 112 SSLSYKKVQ-NKPEQSHGRRPKRKINTRSQKRFSPSPSPVRPRKSMILQPLLKNSPVST 169


>AC199158-3|ABO33287.1|  217|Caenorhabditis elegans Hypothetical
           protein AC8.4 protein.
          Length = 217

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 271 SSTGRRRMQSNLPPRRH-RKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQST 444
           SS   +++Q N P + H R+P     TRS++R S    P  P   ++ Q  ++++P ST
Sbjct: 112 SSLSYKKVQ-NKPEQSHGRRPKRKINTRSQKRFSPSPSPVRPRKSMILQPLLKNSPVST 169


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +1

Query: 271 SSTGRRRMQSNLPPRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQSTP 447
           S + RRR      PRR + P      R RR  S     R+PP     + P Q + Q  P
Sbjct: 475 SRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPP--PRRPRQDSEQQAP 531



 Score = 28.3 bits (60), Expect = 7.8
 Identities = 27/79 (34%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
 Frame = +1

Query: 283 RRRMQSNLP--PRRHRKPPTL*KTRSRRRASLLVEPRNPPTMLLAQLPMQSTPQSTPSTR 456
           RRR  S  P  PRR R P        RRR S    PR            + +PQ   S R
Sbjct: 453 RRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRR-----------RQSPQRRRSPR 501

Query: 457 NFRRCRLQQERLRTPPTKP 513
             RR      R R+PP  P
Sbjct: 502 R-RRSPSSSSRSRSPPPPP 519


>Z71186-4|CAA94916.1|  867|Caenorhabditis elegans Hypothetical
           protein F23D12.5 protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 310 PRRHRKPPTL*KTRSRRRASLLVEPRN 390
           P R RKP TL +T+S++R S    P N
Sbjct: 206 PSRKRKPETLIETKSKKRKSARGRPSN 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,633,496
Number of Sequences: 27780
Number of extensions: 224771
Number of successful extensions: 657
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)