Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F13
         (1117 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical pr...    30   3.4  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   3.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   3.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   3.4  

>Z81125-3|CAB03384.1|  790|Caenorhabditis elegans Hypothetical protein
            T22A3.5 protein.
          Length = 790

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 1115 PPPPPXXXXXXXXPXXXXXXFXXXXXPPPPP 1023
            PPPPP        P      F     PPPPP
Sbjct: 725  PPPPPQFFPMIGGPPLMHPTFSTSAPPPPPP 755


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoformb protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 1115 PPPPPXXXXXXXXPXXXXXXFXXXXXPPPPP 1023
            PPPPP        P      F     PPPPP
Sbjct: 760  PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoforma protein.
          Length = 1435

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 1115 PPPPPXXXXXXXXPXXXXXXFXXXXXPPPPP 1023
            PPPPP        P      F     PPPPP
Sbjct: 760  PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -3

Query: 1115 PPPPPXXXXXXXXPXXXXXXFXXXXXPPPPP 1023
            PPPPP        P      F     PPPPP
Sbjct: 343  PPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.158    0.524 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,639,620
Number of Sequences: 27780
Number of extensions: 199101
Number of successful extensions: 292
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3005123904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)