Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F12
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0911 + 28697654-28697698,28698170-28698278,28698352-286984... 48 1e-05
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 44 2e-04
10_07_0085 + 12751857-12751985,12752326-12752373,12752462-127525... 34 0.13
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 31 1.6
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 30 2.1
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 30 2.8
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 4.9
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 6.5
08_02_0294 - 15432424-15432669,15433007-15433099,15433168-154332... 29 6.5
06_01_0400 + 2862684-2862872,2862956-2863170,2863298-2863448,286... 29 6.5
03_02_0781 + 11141469-11141486,11141855-11141978,11142024-111423... 29 6.5
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 6.5
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 6.5
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 6.5
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 28 8.6
>03_05_0911 +
28697654-28697698,28698170-28698278,28698352-28698433,
28698486-28698514,28699472-28699567,28699860-28699963,
28700071-28700201,28700276-28700369,28701666-28701721,
28702728-28702821
Length = 279
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 686 LGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNYKPDIDIR 826
+GP G+GK+TYC + +T+GR + +V LDPA + +Y DIR
Sbjct: 8 IGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIR 54
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +2
Query: 686 LGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNY 805
+GP G+GK+TYC + +T+GR + +V LDPA + +Y
Sbjct: 8 IGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSY 47
>10_07_0085 +
12751857-12751985,12752326-12752373,12752462-12752508,
12752904-12753003,12753081-12753124,12753541-12753598,
12753795-12753845
Length = 158
Score = 34.3 bits (75), Expect = 0.13
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Frame = +2
Query: 254 NSEAPNNLF----KSVSAEIDDVTTDIVIAECSDKVFLVVSQYQKMGSMLMV-VRDRI-- 412
NS PN F KS+S +I+ TDIVI++ D ++V+Q MG++L + D +
Sbjct: 23 NSVQPNAQFPVPHKSLSLDINGNKTDIVISKYEDNFMVMVTQIGCMGTILAASISDHVFF 82
Query: 413 ---NGPHGI--EDVYSTKVVFGDSGEE-HQAAARFLAETV--DILSKPLCIFINLRSYDI 568
+ + Y+ V+FG E A AR L E + ++ L I + L+ +
Sbjct: 83 LINRKDESVFSDPTYNVSVLFGKRDEPLLLACARQLIEHISGSGSARSLMISLGLKDHSQ 142
Query: 569 ETLKACRDIILD 604
T+K I++
Sbjct: 143 ATMKYIVSTIIE 154
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCM----KMSDMLKTLGR 757
KP + LGPPG+GKTT + K+ D LK G+
Sbjct: 227 KPRRMTLLLGPPGSGKTTLLLALAGKLEDNLKVSGK 262
>02_04_0067 -
19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KPS + LGPPG GKTT + ++ L
Sbjct: 183 KPSRLTLLLGPPGCGKTTLLLALAGKL 209
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KPS + LGPPG GKTT ++ L
Sbjct: 29 KPSRITLLLGPPGCGKTTLLKALAGRL 55
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMS 733
KP + LGPPGAGKTT + ++
Sbjct: 72 KPHRMTLLLGPPGAGKTTLLLALA 95
>08_02_0520 -
18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KP + LGPPG+GKTT + ++ L
Sbjct: 226 KPRRMTLLLGPPGSGKTTLLLALAGKL 252
>08_02_0294 -
15432424-15432669,15433007-15433099,15433168-15433251,
15434311-15434446,15434601-15434746,15435017-15435242,
15435885-15435967,15436867-15437061,15437148-15437246,
15438237-15438350,15438424-15438511,15438790-15438995,
15439306-15439358,15440473-15440776,15441278-15441366,
15441584-15441958,15442382-15442446,15442945-15442970,
15444007-15444225
Length = 948
Score = 28.7 bits (61), Expect = 6.5
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +2
Query: 290 SAEIDDVTTDIVIAECSDKVFLVVSQYQKMGSMLMVVRDRINGPHGIEDVYSTKVVFGDS 469
S I +V DI++ + S++ +VVS K+ M+ + +N +D Y T +
Sbjct: 135 SQRIQNVA-DIILRDPSERKLVVVSAMSKVTDMMY---NLVNKAQSRDDSYIT--ALDEV 188
Query: 470 GEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKA 583
E+H AAA+ L D L F++ D+ LKA
Sbjct: 189 FEKHMAAAKDLLGGED-----LARFLSQLHADVSNLKA 221
>06_01_0400 +
2862684-2862872,2862956-2863170,2863298-2863448,
2863566-2863757,2864471-2864633,2864754-2864989,
2865446-2865622,2865707-2865826,2865939-2866241
Length = 581
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 686 LGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPAND 793
+GPPG GKTT +++ ML R+ +++ +D +N+
Sbjct: 123 IGPPGVGKTTVIREIARMLADDYRKRVMI-VDTSNE 157
>03_02_0781 +
11141469-11141486,11141855-11141978,11142024-11142340,
11143219-11143509,11143751-11143956,11144048-11144327
Length = 411
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 698 GAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNYKPDIDIR 826
G GKTT+ ++ + + ++ LDPA T+ + +IDIR
Sbjct: 78 GTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIR 120
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KP + LGPPG+GKTT + ++ L
Sbjct: 175 KPRRMTLLLGPPGSGKTTLLLALAGKL 201
>01_05_0660 -
24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KP + LGPPG+GKTT + ++ L
Sbjct: 188 KPRRMTLLLGPPGSGKTTLLLALAGRL 214
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KP + LGPPG+GKTT + ++ L
Sbjct: 197 KPRRMTLLLGPPGSGKTTLLLALAGRL 223
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDML 742
KP + LGPPG+GKT+ M ++ L
Sbjct: 174 KPHRMTLLLGPPGSGKTSLLMALAGTL 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,361,548
Number of Sequences: 37544
Number of extensions: 361771
Number of successful extensions: 855
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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