Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F12
         (878 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97196-2|AAB52461.2|  268|Caenorhabditis elegans Hypothetical pr...    56   3e-08
AL033514-15|CAA22102.1|  272|Caenorhabditis elegans Hypothetical...    47   2e-05
U10402-10|AAA19064.1|  355|Caenorhabditis elegans Gro-1 operon g...    37   0.022
AY052770-1|AAL14109.1|  355|Caenorhabditis elegans GOP-2 protein.      37   0.022
U00042-1|AAA50674.1|  456|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z83239-3|CAB05810.1|  344|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z82285-6|CAB05299.1|  252|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z69302-1|CAA93264.1|  191|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical...    29   4.4  
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ...    29   5.8  
AC024771-2|AAK70659.1|  697|Caenorhabditis elegans Hypothetical ...    29   5.8  
Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U97196-2|AAB52461.2|  268|Caenorhabditis elegans Hypothetical
           protein B0207.6 protein.
          Length = 268

 Score = 56.4 bits (130), Expect = 3e-08
 Identities = 22/46 (47%), Positives = 32/46 (69%)
 Frame = +2

Query: 686 LGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNYKPDIDI 823
           +G PGAGK+T+C  ++D+     R  + + LDPANDTM Y PD++I
Sbjct: 7   IGAPGAGKSTFCAGLTDIFSQTKRPFLTINLDPANDTMAYAPDVNI 52


>AL033514-15|CAA22102.1|  272|Caenorhabditis elegans Hypothetical
           protein Y75B8A.14 protein.
          Length = 272

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 20/47 (42%), Positives = 30/47 (63%)
 Frame = +2

Query: 686 LGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNYKPDIDIR 826
           +GP G+GK+TYC  M +   + GR + +V LDPA +  NY   +D+R
Sbjct: 8   MGPAGSGKSTYCSVMYNHCLSTGRTLRMVNLDPACEVFNYPAVVDVR 54


>U10402-10|AAA19064.1|  355|Caenorhabditis elegans Gro-1 operon gene
           protein 2 protein.
          Length = 355

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +2

Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNYKPDIDIR 826
           KPS++   LG  G+GKTT+  +++  L        ++ LDPA   + Y  ++DIR
Sbjct: 30  KPSIL--VLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIR 82


>AY052770-1|AAL14109.1|  355|Caenorhabditis elegans GOP-2 protein.
          Length = 355

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 19/55 (34%), Positives = 31/55 (56%)
 Frame = +2

Query: 662 KPSMVN*SLGPPGAGKTTYCMKMSDMLKTLGRQVIIVXLDPANDTMNYKPDIDIR 826
           KPS++   LG  G+GKTT+  +++  L        ++ LDPA   + Y  ++DIR
Sbjct: 30  KPSIL--VLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIR 82


>U00042-1|AAA50674.1|  456|Caenorhabditis elegans Hypothetical
           protein T04A6.3 protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 434 DVYSTKVVFGDSGEEHQAAARFLAETVDILSKPLCIFINLR 556
           DV +    +G+ G+EH A     A +V IL + LC   N R
Sbjct: 185 DVRNESYGYGNQGKEHSARGPACASSVSILCRKLCQDTNSR 225


>Z83239-3|CAB05810.1|  344|Caenorhabditis elegans Hypothetical
           protein T09F5.3 protein.
          Length = 344

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -1

Query: 395 PLAYFPFFDTEIQLKTLYHYILLSLY 318
           P+   P FDTE+ ++T   Y+LL++Y
Sbjct: 264 PILMGPLFDTEMSIRTGLIYVLLNIY 289


>Z82285-6|CAB05299.1|  252|Caenorhabditis elegans Hypothetical
           protein T28F3.6 protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 686 LGPPGAGKTTYCMKMSDMLK 745
           LGPP AGKTT C  ++D ++
Sbjct: 34  LGPPKAGKTTLCTFLADFME 53


>Z69302-1|CAA93264.1|  191|Caenorhabditis elegans Hypothetical
           protein F40F8.1 protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 686 LGPPGAGKTTYCMKMSDML 742
           LGPPG+GK T C K+ + L
Sbjct: 8   LGPPGSGKGTICAKIQENL 26


>AF022971-11|AAZ32813.1|  265|Caenorhabditis elegans Hypothetical
           protein C31B8.16 protein.
          Length = 265

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 685 GLIDHRRFVLV*IFYLSLLTFCIFFFEVQNDISTSFQCFNVI 560
           G++ H R +      L L  FC F  E + D+S      NVI
Sbjct: 190 GIMYHTRIISAVYCVLPLSVFCQFLIEEETDVSVPISIANVI 231


>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
           protein C33E10.6 protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 218 DLPDIMKNLKIQNSEAPNNLFKSVSAEIDDVTTDIV 325
           D  DI+KNL+ Q +E  N+  ++   E++++   I+
Sbjct: 574 DFRDILKNLEDQKTEVQNSEVQNKDKEVNEINNKII 609


>AC024771-2|AAK70659.1|  697|Caenorhabditis elegans Hypothetical
           protein Y40B10A.4 protein.
          Length = 697

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/67 (28%), Positives = 35/67 (52%)
 Frame = +2

Query: 419 PHGIEDVYSTKVVFGDSGEEHQAAARFLAETVDILSKPLCIFINLRSYDIETLKACRDII 598
           P+G+  +YS +V++G    E +       + +D++ K L + +  R  DI T +   +I+
Sbjct: 448 PNGVTVLYSVRVIYGIFRVEKEIFVPG-KQYLDLVKKDLMLVMERR--DIVTERFIHEIV 504

Query: 599 LDFKKED 619
            D K ED
Sbjct: 505 DDDKDED 511


>Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical
           protein F35C5.8 protein.
          Length = 372

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 607 QKRRYRMSAMTNKRFKPTQTFY-GQLVLGSSWSWE 708
           QKR +  + + +   KP   FY G L L  +W W+
Sbjct: 275 QKRDFNFNLVNSDSTKPVNAFYNGLLNLNGNWYWD 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,146,351
Number of Sequences: 27780
Number of extensions: 373222
Number of successful extensions: 960
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)