Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F12
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   2.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   2.1  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
 Frame = +2

Query: 215 MDLPDIMKNLKIQNSEAPNNLFKSVSAEIDDVTTDI-----VIAECSDKVFLVVSQYQKM 379
           M + + + NLK  ++    N  +SV    D+V +D+     V++E   + F   SQ    
Sbjct: 539 MQMDEFVVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQPYGF 598

Query: 380 GSMLMVVRDRING-PHGIEDVYS 445
              L++ + +  G P+ +  V S
Sbjct: 599 PERLLLPKGKKEGMPYNVLVVVS 621


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
 Frame = +2

Query: 215 MDLPDIMKNLKIQNSEAPNNLFKSVSAEIDDVTTDI-----VIAECSDKVFLVVSQYQKM 379
           M + + + NLK  ++    N  +SV    D+V +D+     V++E   + F   SQ    
Sbjct: 539 MQMDEFVVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQPYGF 598

Query: 380 GSMLMVVRDRING-PHGIEDVYS 445
              L++ + +  G P+ +  V S
Sbjct: 599 PERLLLPKGKKEGMPYNVLVVVS 621


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 287 VSAEIDDVTTDIVIAECS 340
           V A +DD  TD +I ECS
Sbjct: 88  VQAVLDDNETDQLIVECS 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,207
Number of Sequences: 438
Number of extensions: 4154
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)