Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F11
         (980 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643...    30   2.5  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   4.3  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.3  
02_02_0240 + 8196140-8198248,8198381-8198650                           29   5.7  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   7.5  

>02_02_0059 -
           6432945-6433115,6433975-6434061,6434585-6434787,
           6435281-6435392,6435473-6435517,6435622-6435726,
           6435946-6435996,6436026-6436103,6437258-6437313,
           6437784-6437853,6438288-6438392,6438525-6438637,
           6439354-6439534,6439635-6440390
          Length = 710

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 680 PXGPPXRLGXGGXPGFXPPP 739
           P  PP R G GG  G+ PPP
Sbjct: 75  PYPPPDRFGYGGGRGYPPPP 94


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 783 PRXXXGRNRXXPPPXGGGXKPGXPPXPKRXGGP 685
           P    G     PPP  GG +P  PP P   G P
Sbjct: 285 PNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPP 317


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 750 PPPXGGGXKPGXPPXPKRXG 691
           PPP  GG K G PP P + G
Sbjct: 366 PPPPPGGKKGGPPPPPPKGG 385


>02_02_0240 + 8196140-8198248,8198381-8198650
          Length = 792

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -3

Query: 750 PPPXGGGXKPGXPPXPKRXGGPXG 679
           PPP GGG KP  PP       P G
Sbjct: 24  PPPPGGGAKPEPPPTVATHTRPLG 47


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 750 PPPXGGGXKPGXPPXPKRXGGP 685
           PPP   G   G PP P   GGP
Sbjct: 372 PPPGAAGRGGGGPPPPALPGGP 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,324,687
Number of Sequences: 37544
Number of extensions: 309607
Number of successful extensions: 772
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)