Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F08
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical pr...    72   5e-13
U80031-6|AAB37618.2|  491|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amin...    30   2.5  
AL132862-1|CAB60529.2|  434|Caenorhabditis elegans Hypothetical ...    29   3.3  
U00056-1|AAN65308.2|  476|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z68334-2|CAA92728.2|  797|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z54216-10|CAA90949.2|  797|Caenorhabditis elegans Hypothetical p...    28   7.5  
U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF173174-1|AAF13167.1|  796|Caenorhabditis elegans CLC chloride ...    28   7.5  
AB035090-1|BAA86959.1|  797|Caenorhabditis elegans clc chloride ...    28   7.5  

>Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical
           protein T06D8.5 protein.
          Length = 395

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = +1

Query: 541 KTSKAVGYWLLGCSGMVFTAVVLGGVTRLTESGLSMVTWRLLGE-KMPTNEEEWQK 705
           K+ K +G+WL+GC+GM + AV LGGVTRLTESGLSMV W L    K P  +++W++
Sbjct: 46  KSRKRIGWWLMGCAGMCYGAVALGGVTRLTESGLSMVNWDLFRTMKPPFGQKQWEE 101


>U80031-6|AAB37618.2|  491|Caenorhabditis elegans Hypothetical
           protein B0554.7 protein.
          Length = 491

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 526 STPKPKTSKAVGYWLLGCSGMVFTAVVLGGVTRLTE 633
           ST +   S     W +GC  ++  A++LGG+T ++E
Sbjct: 133 STRRSIESNVSLQWAIGCGSLILGAMILGGMTWISE 168


>Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical
           protein ZK829.2 protein.
          Length = 905

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 418 SRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPK 537
           S  +      +R N  G +SL+S +  N  ++R C ++PK
Sbjct: 747 SNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK 786


>Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amino
           acid  decarboxylaseprotein.
          Length = 625

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 418 SRQIITTTKTHRYNILGRLSLSSTIKSNSIIMRFCSSTPK 537
           S  +      +R N  G +SL+S +  N  ++R C ++PK
Sbjct: 467 SNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPK 506


>AL132862-1|CAB60529.2|  434|Caenorhabditis elegans Hypothetical
           protein Y73F8A.2 protein.
          Length = 434

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 472 LSLSSTIKSNSIIMRFCSSTPKPKTSKAVGYWLLGCSGMVFTAVV 606
           LS+SS +           S PK    KA+  W+  C G +F +++
Sbjct: 298 LSVSSLMALTFQFGNIVKSLPKASYVKAIDIWMFSCVGFIFFSLI 342


>U00056-1|AAN65308.2|  476|Caenorhabditis elegans Hypothetical
           protein R05H11.1 protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query: 411 YYFKAN-YHNYKNAQI*HPRKVKSKQHNKIKQ-YYNAIL 521
           YY K++ + NY   +  HP++VKS Q + I Q Y N +L
Sbjct: 107 YYLKSSKFQNYMFCKRSHPKEVKSLQPSTIPQNYINGML 145


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 695 SSSFVGIFSPRSLHVTIDKPDSVSRVTP----PSTTAVKTIPLHPSSQYPTAFDVFG 537
           SSS   +F P +     D+ D     TP    P+TTA   +P  PSS    A ++FG
Sbjct: 387 SSSSYSLFEPPAEWHKFDREDLPIDETPSASSPTTTASLYLPAPPSSSVRAANELFG 443


>Z68334-2|CAA92728.2|  797|Caenorhabditis elegans Hypothetical
           protein C07H4.2 protein.
          Length = 797

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 574 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 669
           G   MV  A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574


>Z54216-10|CAA90949.2|  797|Caenorhabditis elegans Hypothetical
           protein C07H4.2 protein.
          Length = 797

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 574 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 669
           G   MV  A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574


>U88170-2|AAB42250.1|  203|Caenorhabditis elegans Hypothetical
           protein C10G11.9 protein.
          Length = 203

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 23/68 (33%), Positives = 28/68 (41%)
 Frame = +2

Query: 632 SQVCLWSRGDSSERRCPRMKRSGKRVREVXXYPEFNSKIXXTFXDSNGYGXXXRSRTWXX 811
           S V + S   S  RR P  +RS  R R V       SK   +    + YG   RSR+   
Sbjct: 73  SLVLVISGSPSPRRRRPSTRRSSSR-RSVVRSVSRGSKSRRSSSRGSVYGRTGRSRSSKR 131

Query: 812 PRSACSPR 835
            RS   PR
Sbjct: 132 SRSRSRPR 139


>AF173174-1|AAF13167.1|  796|Caenorhabditis elegans CLC chloride
           channel protein protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 574 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 669
           G   MV  A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574


>AB035090-1|BAA86959.1|  797|Caenorhabditis elegans clc chloride
           channel homologue protein.
          Length = 797

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 574 GCSGMVFTAVVLGGVTRLTESGLSMVTWRLLG 669
           G   MV  A VLGGVTR+T S L ++ + L G
Sbjct: 544 GLYAMVGAAAVLGGVTRMTVS-LVVIMFELTG 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,133,586
Number of Sequences: 27780
Number of extensions: 288108
Number of successful extensions: 694
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)