Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F07
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical ... 39 0.005
Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical pr... 34 0.11
U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 29 5.7
U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 28 7.5
AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical ... 28 7.5
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 28 9.9
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 28 9.9
>AF016431-1|AAC24248.2| 311|Caenorhabditis elegans Hypothetical
protein C10B5.1 protein.
Length = 311
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Frame = +2
Query: 170 PPDPVYTIRNVDNVPVYSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQVGQAP 349
PP P++T ++ S L G +LL GS+NG V A+ L++ ++ + V +
Sbjct: 4 PPSPIFTFFGIEG----GATCSCLNNG--QLLVGSQNGMVQAFGLESKIMEHIVYVDEEE 57
Query: 350 ----ILHLIHTDSHLITQEKGG-KLKVFELTNSGYEEDAVIEVDYPGFCRF 487
+ + D+ + + +L+ E++ S ++ IEVD+ GFC F
Sbjct: 58 RRIQSIEISGNDTFVYIRSYAVLQLRKPEMSKSTWKVIRTIEVDHVGFCNF 108
>Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical
protein T08G5.5b protein.
Length = 926
Score = 34.3 bits (75), Expect = 0.11
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Frame = +2
Query: 254 ERLLAGSKNGYVYAYNLQTNRVQQKI-----QVGQAPILHL-IHTDSHLITQEKGGKLKV 415
+ LLAG + G++YAY + NR ++ + ++ L + L+ G+L
Sbjct: 28 QTLLAGGRAGHLYAYTISANRRGFELTNICKSFHKKAVMELKVCQREDLLLCVSDGQLMA 87
Query: 416 FELTNSGYEEDAVIEVDYP--GFCRFEANTKLASLYVPEKDYKINIYNFN-GEKLGSLEY 586
+L++ Y+ + +I P F RF T LYV K +Y F GEK G E+
Sbjct: 88 HKLSDPEYKVETLIHKVKPVQTFARFSPKTS-GDLYVIVSSRK-KLYLFKWGEKDGHKEF 145
Query: 587 DDASVKLGDVMCLKFIEFPCDRPCL 661
+ ++ V F++ P C+
Sbjct: 146 IEVALDYNPV----FLDTPTSIRCV 166
>Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical
protein T08G5.5a protein.
Length = 923
Score = 34.3 bits (75), Expect = 0.11
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Frame = +2
Query: 254 ERLLAGSKNGYVYAYNLQTNRVQQKI-----QVGQAPILHL-IHTDSHLITQEKGGKLKV 415
+ LLAG + G++YAY + NR ++ + ++ L + L+ G+L
Sbjct: 28 QTLLAGGRAGHLYAYTISANRRGFELTNICKSFHKKAVMELKVCQREDLLLCVSDGQLMA 87
Query: 416 FELTNSGYEEDAVIEVDYP--GFCRFEANTKLASLYVPEKDYKINIYNFN-GEKLGSLEY 586
+L++ Y+ + +I P F RF T LYV K +Y F GEK G E+
Sbjct: 88 HKLSDPEYKVETLIHKVKPVQTFARFSPKTS-GDLYVIVSSRK-KLYLFKWGEKDGHKEF 145
Query: 587 DDASVKLGDVMCLKFIEFPCDRPCL 661
+ ++ V F++ P C+
Sbjct: 146 IEVALDYNPV----FLDTPTSIRCV 166
>U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical
protein C33H5.7 protein.
Length = 326
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 185 YTIRNVDNVPVYSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQVGQAPILHLI 364
+T+ N L SF P ++ GS +GY+Y Y+++T + K H+
Sbjct: 236 FTLEEHQNAQKIPLMASFTPES-SHIMVGSSDGYIYFYDVETGEIALKTLAPNNQTCHIA 294
Query: 365 H-TDSHLITQEKGGKLKVF 418
+ H + KL ++
Sbjct: 295 EFSPQHFVAATADTKLTLW 313
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +2
Query: 218 YSLAFSFLPGGLERLLAGSKNGYVYAYNLQTNRVQQKIQVGQAPIL 355
Y + +F G + +++GS++ +Y +NLQT + Q ++ P+L
Sbjct: 302 YCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVL 347
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 368 TDSHLITQEKGGKLKVFELT-NSGYEEDAVIEVDYPGFCRFEANT 499
T S LI ++ GG L+V +++ E + +++++Y G C + +T
Sbjct: 9 TQSALIFEKYGGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHT 53
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 254 ERLLAGSKNGYVYAYNLQTNRVQQKIQVGQAPILHLIHTDSH 379
+ +++GS++G + +++QT ++ Q ++ P+L TDSH
Sbjct: 440 KHIISGSEDGRILVWSIQTKQIVQILEGHTTPVL---ATDSH 478
>U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical
protein F33G12.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2
Query: 251 LERLLAGSKNGYVYAYNLQTNRVQQKIQ 334
+E + +GS++G+VY Y+L + + K++
Sbjct: 238 IEHVASGSEDGFVYVYSLLDSHIVSKLE 265
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 686 LXLWDLNTNKCISKLQVLXXSNVSXLPP 769
+ +WD+ T KCI L+ +NV+ + P
Sbjct: 300 ICVWDIQTQKCIETLKNAHKNNVTFVTP 327
>AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical
protein C09E8.3 protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 347 PILHLIHTDSHLITQEKGGKLKVFELTNSGYEEDAVIEVDYPGFCRFEANTKLASLYVPE 526
P+ + ++ E+ K++VFE + Y E+ +++ GF F ++ LY E
Sbjct: 408 PLYFTKENATKILGNEEKSKIEVFEDLDKSYSEEQKKKLNDDGFA-FLTEKQMERLYGKE 466
Query: 527 KDYK 538
YK
Sbjct: 467 SPYK 470
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -3
Query: 279 FFEPASNLSKPPGKKLKASE*TGTLSTFRIV*TGSGGSSAIFGQAQTKTCVG 124
F PA+NL+ P G + F TG+ S +FG + K G
Sbjct: 170 FLSPANNLNVAPAAYRPPYSTFGGSTPFGAASTGTAAGSTLFGSSTAKPATG 221
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = -3
Query: 279 FFEPASNLSKPPGKKLKASE*TGTLSTFRIV*TGSGGSSAIFGQAQTKTCVG 124
F PA+NL+ P G + F TG+ S +FG + K G
Sbjct: 143 FLSPANNLNVAPAAYRPPYSTFGGSTPFGAASTGTAAGSTLFGSSTAKPATG 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,303,360
Number of Sequences: 27780
Number of extensions: 305601
Number of successful extensions: 799
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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