Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F06
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0097 + 20062385-20062745,20063374-20063613,20063831-200641...    30   2.1  
05_01_0061 - 422914-423027,423114-423149,423250-423324,423412-42...    30   2.8  
06_01_0127 - 977667-978719,978875-979051                               29   4.9  
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076...    29   6.5  

>11_06_0097 +
           20062385-20062745,20063374-20063613,20063831-20064102,
           20064304-20064315
          Length = 294

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -1

Query: 359 LCRSNVLKPPCTSDDNFFVTGFYLEHSKFIIILFTLSYGLCWNVWIIRTGLINRR 195
           LC  ++LK  C  +D     G Y +H + + + F L  G    +W++ + L+ ++
Sbjct: 226 LC-GDILKKKCPGNDASNDYGSYKDHYELLYLCFGLVIGFVLGLWVVFSTLLFKK 279


>05_01_0061 -
           422914-423027,423114-423149,423250-423324,423412-423465,
           423554-423620,423912-424025,424114-424215,424220-424269,
           424380-424424,424559-424642,424996-425100,425300-425443,
           425535-425643,425738-425766
          Length = 375

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +2

Query: 302 SQRNCRLRCRGASEHSTCKALI-----GLERIAPAIILRALDWIMSNLW 433
           S RN R      S ++T K  +     G ER+APAI++   D+ +  LW
Sbjct: 76  SARNARENSSEPSSNTTLKIYVPTNPKGAERLAPAIVVPETDFHLRRLW 124


>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -2

Query: 736 YSXIFTYXLPPSVSVF-YNNIRVPVKSEA---TFLGVILDSRLTGSPHCYYI 593
           YS +F+Y +PPS S F +    VP +  A   TF+   L S  T SP  Y +
Sbjct: 216 YSRVFSYCVPPSTSSFGFIMFGVPPQRAALVPTFVSTPLLSSSTMSPTFYRV 267


>11_06_0211 +
           21305535-21305895,21306512-21306761,21307543-21307652,
           21308836-21309067,21310233-21310603,21311434-21311507,
           21311727-21311880,21312251-21312434,21313066-21313291,
           21313704-21314135,21314399-21314456,21314748-21314829,
           21315350-21315421,21316594-21316737,21317379-21317457,
           21318023-21318105,21318198-21318252,21318488-21318778
          Length = 1085

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -2

Query: 670 PVKSEATFLGVILDSRLTGSPHCYYISDKCEKILN 566
           P + +   +GV++   + GSPH + ISD+   +++
Sbjct: 867 PTRYDMWSVGVVMLELIVGSPHVFQISDRTRALMD 901


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,836,036
Number of Sequences: 37544
Number of extensions: 410397
Number of successful extensions: 772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)