Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F06
(875 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 36 0.002
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 30 0.080
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 30 0.080
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 29 0.19
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.19
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 27 0.75
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 27 0.99
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 1.3
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 2.3
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 3.0
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 25 3.0
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 4.0
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 25 4.0
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 24 5.3
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 35.9 bits (79), Expect = 0.002
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -3
Query: 516 LKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALR 397
+K +YN ++RS+L+Y + P A ++ +++ IQ K R
Sbjct: 888 IKAVYNCIVRSVLEYSCVVWSPTTASSIARIEAIQRKLTR 927
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.3 bits (65), Expect = 0.080
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 703 SVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCL 551
+V V N + +LGV++D++L+ H Y + K + L CL
Sbjct: 735 NVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKALRTAKALGCL 785
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 30.3 bits (65), Expect = 0.080
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 679 IRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILR 557
+ V K +LGV+L L+ PH ++DK +++ LR
Sbjct: 732 VEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALR 772
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 522 SLLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRI 394
S L+ LY AL+R +L+Y + I P +++ IQ R+
Sbjct: 815 SFLRNLYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRV 857
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.19
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 709 PPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCL 551
P V + + + VP +LGV + + L+ PH I+ K +I++ + L
Sbjct: 788 PEEVFITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIVHAVNRL 840
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 27.1 bits (57), Expect = 0.75
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -2
Query: 709 PPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKI 572
P ++V ++ V +LGV L +L+ PH ++++ KI
Sbjct: 712 PTRITVRVGDVDVTSSRSIRYLGVTLQDKLSWLPHVKEVTERAGKI 757
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 26.6 bits (56), Expect = 0.99
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = -2
Query: 709 PPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKIL 569
PP V+ ++ V +LGV L L H +S+K +++
Sbjct: 772 PPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.2 bits (55), Expect = 1.3
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = -2
Query: 709 PPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKI 572
P V++ ++ V +LGV L L+ PH ++ + KI
Sbjct: 779 PTQVTIRVGDVEVTSSRTMRYLGVTLHDHLSWLPHVREVTTRARKI 824
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.4 bits (53), Expect = 2.3
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -2
Query: 709 PPS-VSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKI 572
PPS +S+ VP LGV++ L+ PH ++ + +I
Sbjct: 731 PPSHISIDVRGTAVPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQI 777
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 3.0
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -2
Query: 709 PPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKIL 569
P +++ VP +LGV L L+ PH + K +I+
Sbjct: 727 PEDITITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 649 FLGVILDSRLTGSPHCYYISDKCEKILNIL 560
+LG++LD RL + H Y ++ K+ L
Sbjct: 711 YLGMVLDDRLEYTSHIRYAVERATKLWTTL 740
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.6 bits (51), Expect = 4.0
Identities = 8/49 (16%), Positives = 21/49 (42%)
Frame = -2
Query: 706 PSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNIL 560
P + + + + K +LGV++ PH +K +++ ++
Sbjct: 717 PEIPIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKANRVVKVV 765
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 24.6 bits (51), Expect = 4.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 649 FLGVILDSRLTGSPHCYYISDKCEKILNILRCL 551
+LGV L + S H +++K +I N L CL
Sbjct: 728 YLGVDLCRKQHHSRHLERVANKASRITNALTCL 760
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 24.2 bits (50), Expect = 5.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 477 PKYSLLGHYTKALEEKGWAPHQTPERQ 557
P Y +G+Y + ++ G+A +P Q
Sbjct: 63 PPYDRMGYYQQTMDPAGYARADSPSSQ 89
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,359
Number of Sequences: 2352
Number of extensions: 17290
Number of successful extensions: 48
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -