Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_F06
(875 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 47 3e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 33 0.68
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 33 0.68
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 33 0.68
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 32 1.2
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 31 2.1
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 31 2.1
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 31 2.1
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 2.1
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 31 2.1
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 30 3.6
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 30 4.8
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 30 4.8
AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p pro... 29 8.4
AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA... 29 8.4
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 47.2 bits (107), Expect = 3e-05
Identities = 33/108 (30%), Positives = 54/108 (50%)
Frame = -3
Query: 567 IYCVASLEFGGEPTLSLLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIA 388
I C++SL+F T +LL + A I + L+YG F+ L+K+ + A+R+
Sbjct: 768 IKCLSSLKFNCN-THTLLNVA-KATIIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLAL 825
Query: 387 GAMRSSPINALQVECSEAPLHLRRQFLCDRFLFRAFQVYNHPLYTKLR 244
GA RS+PIN L E + PL ++R + N P++ L+
Sbjct: 826 GAYRSTPINNLLYESNTPPLEMKRDLQIAKLSQNLILSKNTPIHKFLK 873
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -2
Query: 685 NNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCLSGV 542
NN ++P + LG+ L+++ + H + K LNI++CLS +
Sbjct: 727 NNFQIPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKCLSSL 774
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 32.7 bits (71), Expect = 0.68
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 685 NNIRVPVKSEATFLGVILDSRLTGSPH 605
NNI +P E T+LGV LD RLT H
Sbjct: 726 NNICIPQADEVTYLGVHLDRRLTWRKH 752
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 528 TLSLLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 382
+L LLYN++++ I YG+ + + + + QS+ LRII GA
Sbjct: 778 SLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 32.7 bits (71), Expect = 0.68
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -2
Query: 709 PPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPHCYYISDKCEKILNILRCL 551
P + + + + S+A +LG+ LD RLT PH + +C + + LR L
Sbjct: 733 PVTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWL 785
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 32.7 bits (71), Expect = 0.68
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -2
Query: 685 NNIRVPVKSEATFLGVILDSRLTGSPH 605
NNI +P E T+LGV LD RLT H
Sbjct: 726 NNICIPQADEVTYLGVHLDRRLTWRKH 752
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 528 TLSLLKLLYNALIRSILDYGTFILEPCNAVALHKLDIIQSKALRIIAGA 382
+L LLYN++++ I YG+ + + + + QS+ LRII GA
Sbjct: 778 SLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGA 826
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 31.9 bits (69), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 751 SS*KYYSXIFTYXLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 605
+S K + FT V+ + VP + A +LGV+LD RLT S H
Sbjct: 713 NSSKSNNVCFTLKRRTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKH 761
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -2
Query: 664 KSEATFLGVILDSRLTGSPH 605
+S+ ++LGVILDS+LT SPH
Sbjct: 678 ESKQSYLGVILDSKLTLSPH 697
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -2
Query: 664 KSEATFLGVILDSRLTGSPH 605
+S+ ++LGVILDS+LT SPH
Sbjct: 794 ESKQSYLGVILDSKLTLSPH 813
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -2
Query: 664 KSEATFLGVILDSRLTGSPH 605
+S+ ++LGVILDS+LT SPH
Sbjct: 794 ESKQSYLGVILDSKLTLSPH 813
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -2
Query: 664 KSEATFLGVILDSRLTGSPH 605
+S+ ++LGVILDS+LT SPH
Sbjct: 756 ESKQSYLGVILDSKLTLSPH 775
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = -2
Query: 664 KSEATFLGVILDSRLTGSPH 605
+S+ ++LGVILDS+LT SPH
Sbjct: 794 ESKQSYLGVILDSKLTLSPH 813
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 724 FTYXLPPSVSVFYNNIRVPVKSEATFLGVILDSRLTGSPH 605
FT + N+I +P E T+LGV LD RLT H
Sbjct: 715 FTLNRQDCPPLLLNSIPLPKADEVTYLGVHLDRRLTWRRH 754
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -2
Query: 673 VPVKSEATFLGVILDSRLTGSPH 605
+ ++S+ ++LGVILDS+LT S H
Sbjct: 6 IKIESKQSYLGVILDSKLTLSSH 28
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -2
Query: 673 VPVKSEATFLGVILDSRLTGSPH 605
+ ++S+ ++LGVILDS+LT S H
Sbjct: 791 IKIESKQSYLGVILDSKLTLSSH 813
>AY061403-1|AAL28951.1| 1486|Drosophila melanogaster LD33266p protein.
Length = 1486
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 297 FLFRAFQVYNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQ 172
+L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1227 YLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
>AE014296-3600|AAF51764.1| 1486|Drosophila melanogaster CG7158-PA
protein.
Length = 1486
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 297 FLFRAFQVYNHPLYTKLRSLLECMDYPYWTHKSPPCLIVSLQ 172
+L +AF+ +HPLY + C Y Y K P I++ Q
Sbjct: 1227 YLEQAFKDRHHPLYVLNERIANCFHYSYGYWKVKPTPILAKQ 1268
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,435,159
Number of Sequences: 53049
Number of extensions: 714237
Number of successful extensions: 1412
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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