Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F02
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   4.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   7.3  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 482 LLGTCMPPTIRRFIEKXNNPESRIFILQSLVLL*RAFAPSYVF 354
           L  TC PP  +  +   +  + RI I+++       +AP+ VF
Sbjct: 126 LTNTCSPPQGQLVLSSMHKYQPRILIVKASTAQALGWAPTNVF 168


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +3

Query: 186 LVQILFVRSSPIDNEQKEDLSVDVLRRKRSLFSFVGK 296
           LV   +V    IDNE +E L      R RSL+   G+
Sbjct: 124 LVAEAYVSPFRIDNESQELLKYPSFARGRSLYDSRGR 160


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 230  LVVDRRTSHEQNLH*QNSQQNKNV 159
            ++ +RR SH Q L  +N   N NV
Sbjct: 1478 VMAERRKSHMQTLGAKNEYGNNNV 1501



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 439 RXKITQRAEFSYFNH*YYYEGHSLPVMSL*ILHDMQPHEGTYVV 308
           + KI  R  +S   + YY  GH L  + + +       E TY++
Sbjct: 689 KMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLL 732


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 230  LVVDRRTSHEQNLH*QNSQQNKNV 159
            ++ +RR SH Q L  +N   N NV
Sbjct: 1478 VMAERRKSHMQTLGAKNEYGNNNV 1501



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 439 RXKITQRAEFSYFNH*YYYEGHSLPVMSL*ILHDMQPHEGTYVV 308
           + KI  R  +S   + YY  GH L  + + +       E TY++
Sbjct: 689 KMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLL 732


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 230  LVVDRRTSHEQNLH*QNSQQNKNV 159
            ++ +RR SH Q L  +N   N NV
Sbjct: 1478 VMAERRKSHMQTLGAKNEYGNNNV 1501



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 439 RXKITQRAEFSYFNH*YYYEGHSLPVMSL*ILHDMQPHEGTYVV 308
           + KI  R  +S   + YY  GH L  + + +       E TY++
Sbjct: 689 KMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLL 732


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 230  LVVDRRTSHEQNLH*QNSQQNKNV 159
            ++ +RR SH Q L  +N   N NV
Sbjct: 1478 VMAERRKSHMQTLGAKNEYGNNNV 1501



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 439 RXKITQRAEFSYFNH*YYYEGHSLPVMSL*ILHDMQPHEGTYVV 308
           + KI  R  +S   + YY  GH L  + + +       E TY++
Sbjct: 689 KMKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKAVIAENTYLL 732


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +2

Query: 104 NSRAYTRRVTNKRNENEIQHFYFVDCFVSANFVREKFADRQR 229
           N +    ++  KR +NEI+ F  +      NF   +F +  R
Sbjct: 275 NVQVLAYKIEAKRRDNEIKMFVKIVDASCRNFTAARFFELNR 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,234
Number of Sequences: 336
Number of extensions: 2735
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)