Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F02
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    33   1.4  
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    32   3.2  
AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens ...    31   4.2  

>AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37556 fis, clone BRCAN2028545. ).
          Length = 149

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVC 59
           VC   C CA +C+   +C CA+V +C
Sbjct: 107 VCKRVCTCACVCMCVQVCMCASVHMC 132



 Score = 30.3 bits (65), Expect = 9.7
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 133 CHSACI--CARICV*YNLCACATVAVCAS 53
           C  AC+  C R+C    +C C  V +CAS
Sbjct: 100 CKCACVYVCKRVCTCACVCMCVQVCMCAS 128


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVC 59
           VC  A +C R+CV  ++C CA V  C
Sbjct: 82  VCGGAHLCVRLCVGVHICVCACVCGC 107


>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVC 59
           +C S C+C  +CV   +C C  V VC
Sbjct: 33  ICVSVCVCICVCVSVFVCVCICVCVC 58



 Score = 33.1 bits (72), Expect = 1.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVCAS 53
           VC S  +C  +C   +LC C  V+VC S
Sbjct: 125 VCVSVSLCVSVCACLSLCVCIRVSVCLS 152



 Score = 31.1 bits (67), Expect = 5.5
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 196 ICTNKTVNKIKMLNFIFVSL-VCHSACICARICV*YNLCACATVAVC 59
           +C   +   + +  +++V + +C S C+C  + V   +C C +V VC
Sbjct: 4   LCDCVSCVSVSVCLYLYVCVCICVSVCVCICVSVCVCICVCVSVFVC 50


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVCAS 53
           +C   C+C  +C+   LC C  V+VC S
Sbjct: 151 LCVCVCLCVCLCLCVFLCVCVFVSVCVS 178



 Score = 31.5 bits (68), Expect = 4.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVC 59
           +C S C C  +CV   +C C  V VC
Sbjct: 119 LCVSVCFCVSVCVCLCVCVCICVFVC 144



 Score = 30.3 bits (65), Expect = 9.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 136 VCHSACICARICV*YNLCACATVAVC 59
           VC   C+C  +CV  ++C C +V VC
Sbjct: 109 VCLHLCVCVGLCV--SVCFCVSVCVC 132


>AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31338 fis, clone MAMGL1000184. ).
          Length = 181

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 145 VSLVCHSACICARICV*YNLCACATVAVCA 56
           V  +C   C+C  +C    +C C  V +CA
Sbjct: 126 VVCMCACMCVCVHVCACVYVCMCVLVCMCA 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,071,041
Number of Sequences: 237096
Number of extensions: 1499905
Number of successful extensions: 7458
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7347
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)