Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_F01
         (899 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006...    29   3.8  
08_01_1014 - 10262705-10262719,10263545-10264288                       29   6.7  
04_01_0216 - 2739742-2740381,2742346-2742883,2745014-2745911           29   6.7  
04_03_0980 + 21406822-21409496,21410322-21410376                       28   8.8  

>03_06_0476 +
           34199577-34199638,34200267-34200397,34200535-34200698,
           34201007-34201117,34201308-34201387,34201489-34201639,
           34201736-34201829,34202421-34202509,34203672-34203745,
           34203859-34204021,34204445-34204530,34205011-34205094,
           34205186-34205366,34205837-34205887
          Length = 506

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
 Frame = +3

Query: 168 FSQITAVVTSQCTKNNA---ED---KVPEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 329
           FSQ T V+ +Q  + +    +D   K   V  A R++G  L GLV ++V +  + E+KP+
Sbjct: 109 FSQFTVVIATQLPERSLLKLDDICRKANIVLVAARSYG--LTGLVRISVKEHNVIESKPD 166

Query: 330 GALDEV 347
             LD++
Sbjct: 167 HFLDDL 172


>08_01_1014 - 10262705-10262719,10263545-10264288
          Length = 252

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +1

Query: 508 DRIALFIAEGGPECFQQKT--ENLKTCFLNLKQSFPTVESANNLSLVEKCAKVDEMTSCI 681
           DR A  IAE G +  Q K   ++L T F+  K++  +   +    L E CAK+D ++   
Sbjct: 153 DRTA--IAELGADMAQIKLNLQSLHTEFIKAKEATISRGDSQARLLAEICAKLDAISKTR 210

Query: 682 VKSSKSVPTDTATWRNH*SSS 744
             SS   P      R   SSS
Sbjct: 211 QDSSSDDPVQVRVSREEGSSS 231


>04_01_0216 - 2739742-2740381,2742346-2742883,2745014-2745911
          Length = 691

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 457 HH*CGSHIRCLHKDARPCSTELIQPFS 377
           HH C  HI  LH+D +PC+  L + F+
Sbjct: 494 HHECDPHI--LHRDIKPCNVLLDENFN 518


>04_03_0980 + 21406822-21409496,21410322-21410376
          Length = 909

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/70 (25%), Positives = 27/70 (38%)
 Frame = -2

Query: 787 IXFGQTVWQGESLRMNLISDSAM*RCRWEHXXXXXXXXXXSHQLLRIFQQGSSYWRIPQW 608
           I F +  W    L    +SD  M RC W            + Q L +       + +P W
Sbjct: 695 IVFPKHAWNFYGLETAWVSDLLMARCIWSKGSLQYSGSFQNLQHLHLRSCPRLQFVLPVW 754

Query: 607 GSSVSNLKSM 578
            SS  +LK++
Sbjct: 755 ASSFPDLKTL 764


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,034,918
Number of Sequences: 37544
Number of extensions: 410326
Number of successful extensions: 1017
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)