BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_E21
(943 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0486 - 3455030-3455770 35 0.11
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.0
08_01_0059 - 394001-394708 31 1.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.0
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 31 1.3
04_03_0904 + 20717005-20718087 31 1.3
12_01_0841 - 7873458-7874225 31 1.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 1.8
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 1.8
07_01_0479 + 3606663-3607448 30 2.3
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 30 2.3
01_05_0490 + 22672241-22674679 30 2.3
12_02_1174 - 26696869-26698191 30 3.1
07_03_1751 - 29215074-29216270 30 3.1
03_01_0515 - 3864796-3865425 30 3.1
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 30 3.1
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.1
09_02_0369 - 8012470-8013120 29 5.4
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 5.4
04_04_0176 - 23329589-23331043 29 5.4
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 7.1
06_01_0760 - 5676973-5677830 29 7.1
02_04_0400 - 22608519-22608844,22609044-22609122 29 7.1
12_02_0299 - 17051570-17052474,17053542-17053755 28 9.4
12_01_0838 - 7830944-7831444 28 9.4
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 9.4
>06_01_0486 - 3455030-3455770
Length = 246
Score = 34.7 bits (76), Expect = 0.11
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSP--XXXXRXAXSPXXPPPXRVSP 919
P +PP PP P P P P Y PP P P PPP SP
Sbjct: 77 PPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSP 132
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P PP PP P P P Y PP P + P PPP SP
Sbjct: 97 PPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPP------SPPPYVPPPTPPSP 144
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P SPP PP P P P Y PP P P PPP P
Sbjct: 559 PAFSPPPPPPPPPP--PPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPP 610
>08_01_0059 - 394001-394708
Length = 235
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPP 904
P +PP PP P P P P P +P +P PPP
Sbjct: 21 PRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPP 69
Score = 29.9 bits (64), Expect = 3.1
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFS-PXXXXRXAXSPXXPPPXRVSP 919
P P PP P P P P Y PP S P SP P P SP
Sbjct: 17 PPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPPSP 71
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +2
Query: 770 PPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
PP PP P P P PP P PPP +SP
Sbjct: 12 PPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISP 61
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSPXXXGXG 937
P + P PP P P P P PP P PPP SP G
Sbjct: 1164 PPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSPSSLGYQ 1223
Query: 938 P 940
P
Sbjct: 1224 P 1224
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +2
Query: 758 PGXSPPGKXP--PXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P SPP + P P P P P P PP P PPP + P
Sbjct: 1150 PSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQP 1205
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 767 SPPGKXPPXXPLXXPX-PXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSPXXXGXG 937
SPP PP P P P PV Y PP P R + P PPP S G G
Sbjct: 29 SPP---PPTTPESCPDGPSPV-APYFAPPPPPLCRRRRSWPPPPPPPRVSSSSYVGRG 82
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/57 (26%), Positives = 18/57 (31%)
Frame = +2
Query: 734 PXRDFKXXPGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPP 904
P +K P P P P P P P Y P + P +P P P
Sbjct: 238 PPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTP 294
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +2
Query: 734 PXRDFKXXPGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRV 913
P ++ K P +PP K P P P P P Y P P P P +
Sbjct: 64 PPKEHKP-PAYTPP-KPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKP 121
Query: 914 SP 919
+P
Sbjct: 122 TP 123
>12_01_0841 - 7873458-7874225
Length = 255
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -2
Query: 912 TLXGGGXXGEXAXRXXXKGEKGGXXYSX*TGKGXGXXXGXXGGXXPGGEXPG 757
T GGG GE +G GG Y G+G G G G GG G
Sbjct: 29 TEGGGGGGGEGGGGGGGEGGGGGSGYGEGYGQGGGASGGGYGQGGGGGGGGG 80
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/96 (26%), Positives = 28/96 (29%), Gaps = 8/96 (8%)
Frame = +2
Query: 677 PPXXASKKFDXXXSXGGXXPXRDFKXXPGXSPPGKXPPXXPLXXPXPXPVYXE------- 835
PP + G P F P PPG PP P P P +
Sbjct: 30 PPPPQQPAYGHMPPPQGAPPP--FLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQ 87
Query: 836 -YXXPPFSPXXXXRXAXSPXXPPPXRVSPXXXGXGP 940
Y PP P + P PPP SP P
Sbjct: 88 MYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPP 123
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +2
Query: 761 GXSPPGKXPPXXPLXXPXP-XPVYXEYXXPPFSPXXXXR-XAXSPXXPPPXRVSPXXXGX 934
G PP + PP P P P P Y P +P P PPP G
Sbjct: 16 GGFPP-QPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGP 74
Query: 935 GP 940
GP
Sbjct: 75 GP 76
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P PP + PP P P P P PP P P PPP P
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPP-NAPMGMPPRIPPPPVGGTQPPPPPPPLANGP 316
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSPXXXGXG 937
PG PP PP P+ P V + P P P PP +V P G
Sbjct: 171 PGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPP--QVRPGMPGGP 228
Query: 938 P 940
P
Sbjct: 229 P 229
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +2
Query: 734 PXRDFKXXPGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRV 913
P ++ P PG PP P P E PP SP P PPP
Sbjct: 53 PQAMYQAHPQYPMPGSLPPPPP----RPPSFAPENALPPSSPPPPSPPPPPPSSPPPVPP 108
Query: 914 SP 919
SP
Sbjct: 109 SP 110
>01_05_0490 + 22672241-22674679
Length = 812
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
Frame = +2
Query: 677 PPXXASKKFDXXXSXGGXXPXRDFKXXPGXSPPGKXP-------PXXPLXXPXPXPVYXE 835
PP S F GG R P PP P P P P P P
Sbjct: 611 PPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRPAPPPPPPP 670
Query: 836 YXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
PPF P P PP + P
Sbjct: 671 QQQPPFYPRRAVVYYTYPLPPPSPPLPP 698
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +2
Query: 770 PPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPP 904
PP PP P P P P P P + P PPP
Sbjct: 148 PPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPP 192
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 749 KXXPGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXR 910
K P S P PP P P P V P P + SP PPP R
Sbjct: 145 KPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQ-PPSPPPPPPTR 197
>07_03_1751 - 29215074-29216270
Length = 398
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 903 GGGXXGEXAXRXXXKGEKGGXXYSX*TGKGXGXXXGXXGGXXPGG 769
GGG G A G+ GG GKG G G GG GG
Sbjct: 305 GGGGGGAGAGGGFGGGKGGGFGGGFGGGKGGGVGGGAGGGFGGGG 349
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 3.1
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +2
Query: 758 PGXSPPG--KXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P PP PP PL P P P PP SP SP PPP SP
Sbjct: 72 PPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPP-SPPPPSPVKSSP--PPPPAWSP 124
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 770 PPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSPXXXGXGP 940
PP P P P P P PP P A SP PPP P P
Sbjct: 63 PPAAGPLMPP---PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSP 116
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 770 PPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
PP PP P P P PP+S SP PPP SP
Sbjct: 77 PPPPPPPPPPPPVPVPPAYSVTSSVPPYS--MTSSLPPSPRPPPPLPFSP 124
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P PP P P P P PP P P PPP SP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 749 KXXPGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPP 904
K P PP PP P P P P PP P + P PPP
Sbjct: 333 KAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK--GGPPPPPP 382
>09_02_0369 - 8012470-8013120
Length = 216
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXR 910
P PP K PP P P PP P A P PPP R
Sbjct: 44 PHDDPPLKPPPQQQFITAQPPPP----DEPPLKPPPSFYPAVLPPEPPPPR 90
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +2
Query: 770 PPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXR 910
PP PP P P P P PP P + PPP +
Sbjct: 586 PPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPPLK 632
>04_04_0176 - 23329589-23331043
Length = 484
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPF-SPXXXXRXAXSPXXPPPXRVSP 919
PG S PP P P P P PP +P + P P R SP
Sbjct: 67 PGHSALSPSPPPPPRRGPLPDPTAKAEPEPPKPTPQQQPQPLLPAAKPAPPRASP 121
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +2
Query: 722 GGXXPXRDFKXXPGXS--PPG-KXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPX 892
GG P + PG + PP + PP P P P P+ PP +P + P
Sbjct: 3 GGTGPGAEL-LSPGEAEWPPELRLPPPPPPHPPPPPPLEPA---PPSTPQLRGEASPPPP 58
Query: 893 XPPP 904
PPP
Sbjct: 59 PPPP 62
>06_01_0760 - 5676973-5677830
Length = 285
Score = 28.7 bits (61), Expect = 7.1
Identities = 22/82 (26%), Positives = 27/82 (32%)
Frame = -2
Query: 903 GGGXXGEXAXRXXXKGEKGGXXYSX*TGKGXGXXXGXXGGXXPGGEXPGXXLKSRXGXXP 724
GGG G + G G Y +G G G GG GG G S G
Sbjct: 36 GGGGGGGGSGNGSGWGSGSGSGYGQSSGSGGAYASGGGGGGGGGGGQNGG---SGYGSGS 92
Query: 723 PXXXXXSNFFXAXSGGAXAXGK 658
+ + GGA A G+
Sbjct: 93 GSGYGQAGGYGPYGGGAYAQGE 114
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -2
Query: 903 GGGXXGEXAXRXXXKGEKGGXXYSX*TGKGXGXXXGXXGGXXPGGEXPGXXLKSRXGXXP 724
GGG G G GG G+G G G GG GG G G P
Sbjct: 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYP 95
Query: 723 P 721
P
Sbjct: 96 P 96
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
P SPP PP P P P P P F P + P PPP P
Sbjct: 282 PIFSPPSPPPPPPP-AFPFPFPQLP--PLPHFPPLPSFYPSPPPPPPPPPPPPP 332
>12_01_0838 - 7830944-7831444
Length = 166
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = -2
Query: 918 GETLXGGGXXGEXAXRXXXKGEKGGXXYSX*TGKGXGXXXGXXGGXXPGGEXPG 757
GE+ GGG G G G Y+ GKG G G G GG G
Sbjct: 32 GESGGGGGGGGGGGGGGNGSGSGSGYGYNY--GKGGGQSGGGQGSGGGGGGGGG 83
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 425 NESAN---ARGEAVCVLGALPLPRSLTRCAR 508
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,852,858
Number of Sequences: 37544
Number of extensions: 380636
Number of successful extensions: 1264
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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