Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E21
         (943 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46023-1|AAC50551.1|  701|Homo sapiens protein ( Human Xq28 mRNA...    32   2.6  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          31   4.6  
BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein.        31   8.0  
AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif prote...    31   8.0  
AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif prote...    31   8.0  
AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif prote...    31   8.0  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    31   8.0  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   8.0  
AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein.     31   8.0  

>U46023-1|AAC50551.1|  701|Homo sapiens protein ( Human Xq28 mRNA,
           complete cds. ).
          Length = 701

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 761 GXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSP 859
           G  PPG  PP  P+    P P+      PPFSP
Sbjct: 257 GLPPPGLSPPSRPVPSLQPPPLPLPPPPPPFSP 289


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 18/61 (29%), Positives = 19/61 (31%)
 Frame = +2

Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSPXXXGXG 937
           P   PP   PP  P   P P      Y  P   P        SP  PPP +        G
Sbjct: 70  PPPPPPPPPPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPG 129

Query: 938 P 940
           P
Sbjct: 130 P 130


>BC070071-1|AAH70071.1| 1271|Homo sapiens RBM16 protein protein.
          Length = 1271

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 785 PPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
           PP  P+  P P P +     PPF      R + +P  PPP  + P
Sbjct: 656 PPAFPVSMPVPPPGFSPIPPPPF-----LRASFNPSQPPPGFMPP 695


>AL591499-2|CAH70694.1| 1271|Homo sapiens RNA binding motif protein
           16 protein.
          Length = 1271

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 785 PPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
           PP  P+  P P P +     PPF      R + +P  PPP  + P
Sbjct: 656 PPAFPVSMPVPPPGFSPIPPPPF-----LRASFNPSQPPPGFMPP 695


>AL136976-1|CAI21482.1| 1271|Homo sapiens RNA binding motif protein
           16 protein.
          Length = 1271

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 785 PPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
           PP  P+  P P P +     PPF      R + +P  PPP  + P
Sbjct: 656 PPAFPVSMPVPPPGFSPIPPPPF-----LRASFNPSQPPPGFMPP 695


>AL121952-2|CAI21474.1| 1271|Homo sapiens RNA binding motif protein
           16 protein.
          Length = 1271

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 785 PPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
           PP  P+  P P P +     PPF      R + +P  PPP  + P
Sbjct: 656 PPAFPVSMPVPPPGFSPIPPPPF-----LRASFNPSQPPPGFMPP 695


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 18/54 (33%), Positives = 19/54 (35%)
 Frame = +2

Query: 758 PGXSPPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
           P   PP   PP  P   P P P Y     PP  P      A  P  PP   + P
Sbjct: 321 PASFPPPAIPPPTP-GYPPPPPTYNPNFPPP-PPRLPPTHAVPPHPPPGLGLPP 372


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 16/50 (32%), Positives = 17/50 (34%)
 Frame = +2

Query: 770  PPGKXPPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
            PP   PP  PL  P   P       PP  P    R    P  P P  + P
Sbjct: 957  PPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPP 1006


>AB029039-1|BAA83068.2| 1330|Homo sapiens KIAA1116 protein protein.
          Length = 1330

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 785 PPXXPLXXPXPXPVYXEYXXPPFSPXXXXRXAXSPXXPPPXRVSP 919
           PP  P+  P P P +     PPF      R + +P  PPP  + P
Sbjct: 715 PPAFPVSMPVPPPGFSPIPPPPF-----LRASFNPSQPPPGFMPP 754


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,806,205
Number of Sequences: 237096
Number of extensions: 2190011
Number of successful extensions: 7606
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7083
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)