Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E20
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_1077 - 11027732-11027839,11028346-11028477,11029722-110298...    29   4.9  
07_03_0167 - 14649782-14649864,14649954-14650078,14650357-146504...    29   4.9  

>08_01_1077 -
           11027732-11027839,11028346-11028477,11029722-11029802,
           11029911-11030063,11030167-11030281,11030282-11030927,
           11031409-11031613,11031696-11031758
          Length = 500

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +1

Query: 385 EVRPSLGEKFQSQNVREIIVTTMQE 459
           E+R  +G  F ++N+++I ++TMQE
Sbjct: 405 EIRLMVGRSFSAENLKKICISTMQE 429


>07_03_0167 -
           14649782-14649864,14649954-14650078,14650357-14650400,
           14650873-14651003,14652469-14652559,14653335-14653445,
           14653623-14653774,14653863-14654067,14654436-14654764,
           14654850-14655309
          Length = 576

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -3

Query: 633 HAPLCAFHPGAFHF-YHDTLYQNFVPFHIQVLNSLSNSVSDFL 508
           HA  C F  G  +  +H   Y  FVPFHI   +   + +  F+
Sbjct: 99  HARSCTFSDGIIYICFHS--YSQFVPFHILTSHCTKDDMDSFM 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,426,859
Number of Sequences: 37544
Number of extensions: 349663
Number of successful extensions: 661
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)