Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E19
         (878 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial ...    51   2e-06
BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p pro...    51   2e-06
AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA...    51   2e-06
BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p pro...    45   1e-04
AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA...    45   1e-04

>X99665-1|CAA67979.1|  106|Drosophila melanogaster mitochondrial
           ATPase couplingfactor 6 subunit protein.
          Length = 106

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 36/76 (47%)
 Frame = +3

Query: 159 LRKLPIPSNSCF*IKSGXYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTA 338
           L K   P    F  K   YKQKSAGGK+ D++P +             Q+G     DM  
Sbjct: 28  LNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLK 87

Query: 339 FPSLKFEEPKLDPIDE 386
           FP  +F + K+DPI +
Sbjct: 88  FPEFQFPDVKVDPITQ 103



 Score = 35.5 bits (78), Expect = 0.097
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 95  SKLVGLRAATTSMMVTRNLAAA--QKATDPIQQLFLDKIRXIQTEERG 232
           S L G+R   T       + A    KA+DPIQQLFLDK+R  + +  G
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAG 52


>BT001763-1|AAN71518.1|  106|Drosophila melanogaster RH08870p
           protein.
          Length = 106

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 36/76 (47%)
 Frame = +3

Query: 159 LRKLPIPSNSCF*IKSGXYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTA 338
           L K   P    F  K   YKQKSAGGK+ D++P +             Q+G     DM  
Sbjct: 28  LNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLK 87

Query: 339 FPSLKFEEPKLDPIDE 386
           FP  +F + K+DPI +
Sbjct: 88  FPEFQFPDVKVDPITQ 103



 Score = 35.5 bits (78), Expect = 0.097
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 95  SKLVGLRAATTSMMVTRNLAAA--QKATDPIQQLFLDKIRXIQTEERG 232
           S L G+R   T       + A    KA+DPIQQLFLDK+R  + +  G
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAG 52


>AE014297-3317|AAF56127.1|  106|Drosophila melanogaster CG4412-PA
           protein.
          Length = 106

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 36/76 (47%)
 Frame = +3

Query: 159 LRKLPIPSNSCF*IKSGXYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTA 338
           L K   P    F  K   YKQKSAGGK+ D++P +             Q+G     DM  
Sbjct: 28  LNKASDPIQQLFLDKVREYKQKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLK 87

Query: 339 FPSLKFEEPKLDPIDE 386
           FP  +F + K+DPI +
Sbjct: 88  FPEFQFPDVKVDPITQ 103



 Score = 35.5 bits (78), Expect = 0.097
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 95  SKLVGLRAATTSMMVTRNLAAA--QKATDPIQQLFLDKIRXIQTEERG 232
           S L G+R   T       + A    KA+DPIQQLFLDK+R  + +  G
Sbjct: 5   SLLSGMRVLRTEARRNFGIVAPALNKASDPIQQLFLDKVREYKQKSAG 52


>BT023609-1|AAY85009.1|  159|Drosophila melanogaster IP06415p
           protein.
          Length = 159

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 25/75 (33%), Positives = 30/75 (40%)
 Frame = +3

Query: 177 PSNSCF*IKSGXYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKF 356
           P    F  K   Y+ KS  GK  D  P               QYGGG G+DM  FP  K 
Sbjct: 39  PIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGEGVDMLEFPKFKL 98

Query: 357 EEPKLDPIDEQAAPK 401
            +  +DPI     P+
Sbjct: 99  PDIDIDPISVDDLPE 113


>AE014296-920|AAF47954.1|  147|Drosophila melanogaster CG12027-PA
           protein.
          Length = 147

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 25/75 (33%), Positives = 30/75 (40%)
 Frame = +3

Query: 177 PSNSCF*IKSGXYKQKSAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKF 356
           P    F  K   Y+ KS  GK  D  P               QYGGG G+DM  FP  K 
Sbjct: 27  PIYQIFLDKVREYRLKSPKGKPVDPGPEFEAELKEVTERLALQYGGGEGVDMLEFPKFKL 86

Query: 357 EEPKLDPIDEQAAPK 401
            +  +DPI     P+
Sbjct: 87  PDIDIDPISVDDLPE 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,227,155
Number of Sequences: 53049
Number of extensions: 541093
Number of successful extensions: 805
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)