Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E18
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0217 + 15814303-15814905                                         31   1.6  
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894...    30   2.1  
11_04_0172 - 14474674-14474761,14474842-14475012,14475090-144755...    29   4.9  
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342...    28   8.5  

>12_02_0217 + 15814303-15814905
          Length = 200

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 56  SGSAAGLCQGTRVQRDRPNMWLGSRGPG 139
           +  AAG CQ  R +R    +WLGS G G
Sbjct: 166 AAGAAGFCQRRRRERRSATVWLGSSGRG 193


>12_02_1036 -
           25587313-25587890,25589209-25589272,25589356-25589448,
           25589533-25589683,25590474-25590539,25590594-25590907
          Length = 421

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 100 RPPQHVAGVAWARMRRPA--ASSDVARPLDWPRY*RDSPRRLATRQTRISI 246
           RP + V G AW  +RRP+   +SDV      P++ RD+ ++L     R SI
Sbjct: 318 RPTEEVRGEAWHYLRRPSEDGTSDVMEGHADPKFQRDN-KQLENHVDRYSI 367


>11_04_0172 -
           14474674-14474761,14474842-14475012,14475090-14475517,
           14478824-14478961,14479048-14479482,14479559-14479783,
           14479860-14480159
          Length = 594

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = -3

Query: 189 RPVQRPSDVAGRRRPSHP--GPRDPSHMLGRSRCTRVPWHSPA-ALP 58
           RP QR S  A    P+    GP    H+   + CT V W +P  A+P
Sbjct: 292 RPTQRRSSCASTEAPAEQPKGPAAVDHIPEPTSCTLVDWVTPGFAIP 338


>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
            26834330-26834732,26834840-26835118,26835285-26835716,
            26836362-26836838,26837171-26837212,26837285-26837545,
            26837637-26838938,26839146-26839575,26839643-26840046,
            26840360-26840716,26840842-26841102,26841494-26842141,
            26842231-26842452,26842547-26842768,26842860-26843009,
            26843739-26844111,26844467-26844689,26845167-26845425,
            26845585-26845920,26846013-26846999,26848395-26849624,
            26849706-26849768,26849858-26849910,26849998-26850079,
            26850520-26850588,26851070-26851129,26851205-26851267,
            26851993-26852101,26852742-26852827,26853120-26853847,
            26854613-26854676
          Length = 3716

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 144  SHPGPRDPSHMLGRSRCTRVPWHSPAALPES 52
            SHP PR PS ++     T   WH+  AL ES
Sbjct: 2569 SHPQPRMPSELIKYIGKTCNAWHTSIALLES 2599


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,915,182
Number of Sequences: 37544
Number of extensions: 365927
Number of successful extensions: 1184
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)