Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_E17
(945 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 37 0.027
02_05_0686 - 30900748-30902167,30903442-30904742 37 0.027
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 35 0.082
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 33 0.25
08_01_0059 - 394001-394708 31 1.0
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.8
07_03_1267 + 25318220-25318407,25318674-25318844,25319086-253191... 30 3.1
07_03_0817 - 21735283-21735358,21735719-21735796,21735885-217359... 30 3.1
07_01_0479 + 3606663-3607448 30 3.1
09_02_0495 + 9880714-9881196 29 4.1
07_01_0080 + 587674-588510 29 7.1
01_01_0082 + 625198-625719 29 7.1
01_07_0082 - 40965947-40967023 28 9.4
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 36.7 bits (81), Expect = 0.027
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -1
Query: 639 LPXGPPXXXGGPX*PPPGGGXGXXPPPP 556
LP PP G P PPP G G PPPP
Sbjct: 613 LPPPPPRPPGAPPPPPPPGKPGGPPPPP 640
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 36.7 bits (81), Expect = 0.027
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 636 PXGPPXXXGGPX*PPPGGGXGXXPPPPXXG 547
P PP P PPPGG G PPPP G
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Score = 31.9 bits (69), Expect = 0.76
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 627 PPXXXGGPX*PPPGGGXGXXPPPPXXG 547
PP GP PPP G PPPP G
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 636 PXGPPXXXGGPX*PPPGGGXGXXPPPP 556
P PP G P PPP G PPPP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 822 PPFPPRXXPPXXXPPLGXXPP 884
PP PP PP PP G PP
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPP 365
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 636 PXGPPXXXGGPX*PPPGGGXGXXPPPP 556
P GPP PPP G PPPP
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 627 PPXXXGGPX*PPPGGGXGXXPPPPXXG 547
PP GP PPP G PPPP G
Sbjct: 337 PPPPPKGPPPPPP--AKGPPPPPPPKG 361
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 636 PXGPPXXXGGPX*PPPGGGXGXXPPPP 556
P P GGP PPP GG P P
Sbjct: 367 PPPPGGKKGGPPPPPPKGGASRPPAAP 393
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 35.1 bits (77), Expect = 0.082
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 645 GFLPXGPPXXXGGPX*PPPGGGXGXXPPPPXXG 547
G P P G P PPP GG PPPP G
Sbjct: 1096 GVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIG 1128
Score = 34.3 bits (75), Expect = 0.14
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = -1
Query: 690 PLGXGGXXWRXXXXXGFLPXGPPXXXGGPX*PPPGGGXGXXPPPPXXG 547
P G GG P PP GGP PPP GG G PP G
Sbjct: 1189 PRGHGGVGGPPTPPGAPAPPMPPGVPGGP--PPPPGGRGLPAPPGGRG 1234
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -1
Query: 636 PXGPPX--XXGGPX*PPPGGGXGXXP-PPPXXG 547
P PP GG PPP GG G P PPP G
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAG 1168
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 645 GFLPXGPPXXXGGPX*PPPGGGXGXXPPPP 556
G P P GGP PPP G PPP
Sbjct: 1147 GVPPPPPVGGLGGPPAPPPPAGFRGGTPPP 1176
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 636 PXGPPXXXGGPX*PPPGGGXGXXPPPPXXG 547
P P G PPP G G PPPP G
Sbjct: 1087 PLPPTLGDYGVAPPPPSIGAGAPPPPPPPG 1116
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 33.5 bits (73), Expect = 0.25
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 627 PPXXXGGPX*PPPGGGXGXXPPPP 556
PP G P PPP G G PPPP
Sbjct: 922 PPRPPGAPPPPPPPGKPGGPPPPP 945
>08_01_0059 - 394001-394708
Length = 235
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 822 PPFPPRXXPPXXXPPLGXXPPXT 890
PP PPR PP PP+ PP T
Sbjct: 17 PPPPPRRAPPPPSPPIRPPPPPT 39
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -1
Query: 630 GPPXXXGGPX*PPPGGGXGXXPP--PPXXG 547
G P GG PPGGG G PP PP G
Sbjct: 96 GAPGPLGGGGARPPGGGGGGGPPSLPPGAG 125
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 696 GXPLGXGGXXWRXXXXXGFLPXGPPXXXGGPX*PPP-GGGXGXXPPPPXXG 547
G P G GG G P G G P PP GGG G PP P G
Sbjct: 89 GLPPGGGGAPG-PLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGG 138
Score = 29.1 bits (62), Expect = 5.4
Identities = 29/103 (28%), Positives = 30/103 (29%), Gaps = 7/103 (6%)
Frame = -1
Query: 690 PLGXGGXXWRXXXXXGFLPXGPPXXXGG--PX*PPPGGGXGXXPP-----PPXXGXXXFW 532
PLG GG G P PP GG P PGGG G P G
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALAR 159
Query: 531 XXXXXXXXXXXXPPXGGGGXFXXXXXXXXXXXXXXXXKXPGGG 403
PP GGGG + PGGG
Sbjct: 160 PPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGG 202
>07_03_1267 +
25318220-25318407,25318674-25318844,25319086-25319188,
25319394-25319885,25320723-25321156,25321333-25321388,
25321711-25321775,25322139-25322147
Length = 505
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 624 PXXXGGPX*PPPGGGXGXXPPPP 556
P GG PPP GG PPPP
Sbjct: 77 PDGGGGGEMPPPYGGAAAAPPPP 99
>07_03_0817 -
21735283-21735358,21735719-21735796,21735885-21735945,
21736038-21736069,21736144-21736221,21738046-21738213,
21738711-21738897,21740019-21740160
Length = 273
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -1
Query: 687 LGXGGXXWRXXXXXGFLPXGP-PXXXGGPX*PPPGGGXGXXPPPPXXG 547
+G GG F P P P GGP PPGG PP G
Sbjct: 194 IGGGGSMHVGPNDPRFFPSNPFPVPFGGPGSVPPGGRYDPIGPPDVPG 241
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -1
Query: 636 PXGPPXXXGG-PX*PPPGGGXGXXPPP 559
P GPP G P PPPG G PPP
Sbjct: 214 PMGPPQVRPGMPGGPPPGMRPGMPPPP 240
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 678 GGXXWRXXXXXGFLPXGPPXXXGGPX*PPPGGGXGXXPPPPXXGXXXFW 532
GG G P PP G PP GGG P PP W
Sbjct: 66 GGDGGAGGLFGGTYPPPPPGVMPGAFAPPFGGGFPYGPAPPPPNPILPW 114
>07_01_0080 + 587674-588510
Length = 278
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 636 PXGPPXXXGGPX*PPPGGGXGXXPPPP 556
P PP G P PPP PPPP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 822 PPFPPRXXPPXXXPPLGXXPPXT 890
PP PP PP PP+ PP T
Sbjct: 66 PPPPPVYYPPPSPPPVAYPPPTT 88
>01_07_0082 - 40965947-40967023
Length = 358
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 597 PPPGGGXGXXPPPPXXG 547
PPP G G PPPP G
Sbjct: 269 PPPQAGYGYPPPPPQAG 285
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,355
Number of Sequences: 37544
Number of extensions: 403418
Number of successful extensions: 1454
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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