Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E14
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0463 - 3424951-3425065,3425191-3425258,3425362-3425586,342...    29   3.8  
03_02_0915 + 12360079-12360095,12360225-12361353                       29   5.0  
03_02_0905 - 12292322-12293073,12293288-12293471                       28   8.7  

>01_01_0463 -
           3424951-3425065,3425191-3425258,3425362-3425586,
           3425669-3425804,3425905-3426107,3426227-3426340,
           3426432-3426506,3426625-3426783,3426868-3427038,
           3427227-3427274,3427366-3427491,3427611-3427718,
           3427800-3427913,3428320-3428496
          Length = 612

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -2

Query: 681 CNXWPLAXVSALLSRDPAKEPAPEVSLGIASSLLXLYLNLIRNCLXSNSITSNCL 517
           C  W        L R PA EP+P +  GI  SLL  +L L+   L  + + + CL
Sbjct: 307 CLVWRNLSAHDFLPRPPAVEPSPILLRGIRQSLLS-HLTLV---LGKDELAAQCL 357


>03_02_0915 + 12360079-12360095,12360225-12361353
          Length = 381

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -2

Query: 633 PAKEPAPEVSLGIASSLLX--LYLNLIRNCLXSNSITSNCLFNSSTSCCACRYFNLYSXC 460
           PA  PAP  S G +  ++   LY  + RN + +  + S C F+S    C   +    S C
Sbjct: 152 PASSPAPAES-GESGGVIPAELYCKICRNVMANAVLASKCCFDSFCDRCIRDHIAAKSRC 210


>03_02_0905 - 12292322-12293073,12293288-12293471
          Length = 311

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = -2

Query: 636 DPAKEPAPEVSLGIASSLLXLYLNLIRNCLXSNSITSNCLFNSSTSCCACRYFNLYSXC 460
           D  + PA   S G+  +   LY  + RN +    +TS C F+S    C   +    S C
Sbjct: 68  DVTRRPASGESDGVIPA--ELYCKICRNVMADAVVTSKCCFDSFCDGCIRDHIASKSKC 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,866,620
Number of Sequences: 37544
Number of extensions: 225704
Number of successful extensions: 553
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)