Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E14
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78016-6|CAB01441.1|  336|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U80837-2|AAB37902.1|  315|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF016451-1|AAB66002.2|  294|Caenorhabditis elegans Serpentine re...    28   7.8  
AF003132-1|AAB54133.3|  798|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z78016-6|CAB01441.1|  336|Caenorhabditis elegans Hypothetical
           protein R186.2a protein.
          Length = 336

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -1

Query: 541 KFYNIQLSFQFFDFLLCL*ILQSVFLXLXIFLSQSHFRFLQFLFQFSDL 395
           K Y +     +  FL    I  SV L   IF S SH  FL+FL   + L
Sbjct: 14  KIYEVINEIVYPIFLTITLIFHSVLLVFIIFFSPSHLNFLKFLLLTTSL 62


>U80837-2|AAB37902.1|  315|Caenorhabditis elegans Hypothetical
           protein F07E5.2 protein.
          Length = 315

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 168 FTDSPKPLSVLSRYSDSLKI 109
           FT+ P PLSVLSR  D LK+
Sbjct: 172 FTEGPIPLSVLSRNLDGLKV 191


>AF016451-1|AAB66002.2|  294|Caenorhabditis elegans Serpentine
           receptor, class x protein38 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 421 QFLFQFSDLRFQSRHLFFGIFPIFFMS 341
           QF F FS + + S H F GIF + F S
Sbjct: 238 QFTFIFSSILWSSVHCFDGIFTLIFNS 264


>AF003132-1|AAB54133.3|  798|Caenorhabditis elegans Hypothetical
           protein F37E3.1 protein.
          Length = 798

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 497 QEVEELKRQLDVIEFDXKQFLIKFR*RXKSED 592
           Q +E+L RQ++V+E D K+   K   + K ED
Sbjct: 638 QALEKLTRQINVVEKDIKELTEKTENKIKEED 669


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,417,155
Number of Sequences: 27780
Number of extensions: 214205
Number of successful extensions: 596
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)