Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_E11
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 36 0.056
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 32 0.69
11_05_0035 - 18509505-18509615,18509840-18509950,18510318-185103... 29 3.7
09_02_0061 + 3738335-3738380,3738818-3738945,3741032-3741081,374... 29 3.7
06_03_0819 - 24977204-24977290,24977372-24977746,24977823-249781... 29 3.7
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 29 3.7
12_01_1069 - 11060045-11060262,11060404-11060545,11060624-110607... 29 4.9
07_03_1462 + 26716197-26716484,26716618-26716746,26716963-267170... 28 8.5
03_06_0205 - 32347636-32347646,32347762-32347801,32347959-323480... 28 8.5
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 35.5 bits (78), Expect = 0.056
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 328 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQ 441
Q K + ++ ++C +LQDE+E L+++ +EKQ L QLQ
Sbjct: 665 QMKSLTKKHEENCQKLQDELE-LQKSKEEKQRALLQLQ 701
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Frame = +1
Query: 328 QTKLVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHKSS---------PXKE 480
+TKL +R+ +D+ +L++E+EK +E + ++ + Q + + ++S+ K
Sbjct: 956 ETKLKSRKENDELFQLKEELEKYKEEAQANKSYMLQYKEIANSNESALKQMESALQDFKT 1015
Query: 481 EI*TICTSTENSINKL 528
E TI S E+ I KL
Sbjct: 1016 ESETIKKSLEDEITKL 1031
>11_05_0035 -
18509505-18509615,18509840-18509950,18510318-18510377,
18510459-18510576,18510711-18510811,18510891-18510962,
18511069-18511156,18511423-18511557,18511655-18511767,
18511980-18512051,18512154-18512258,18512371-18512484,
18512587-18512681,18513539-18513686
Length = 480
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 298 MKQTKITKLFQTK--LVARRSSDDCDELQDEIEKLRENLKEKQNELFQLQRNSYKHK 462
++ TKI +LF K L A++ DE+ +E+E+ +++ + E +L+++S + K
Sbjct: 212 LRVTKIDRLFSKKKQLRAKKDPKKTDEVNEEVEEQEFSVERIRLEKMELRKSSTEAK 268
>09_02_0061 +
3738335-3738380,3738818-3738945,3741032-3741081,
3741183-3741254,3741669-3741819,3741862-3741906
Length = 163
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 781 RHSGIMILSYSSITALILKPRG--KDXLGNYVCSCLHFNPES 662
R S S S+TA+++K KD LG +C C H++ ++
Sbjct: 40 RRSNTFFCSEKSVTAVVIKGLADHKDQLGAPLCPCRHYDDKA 81
>06_03_0819 -
24977204-24977290,24977372-24977746,24977823-24978199,
24978456-24978770,24978861-24979296,24979386-24979463
Length = 555
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/84 (21%), Positives = 36/84 (42%)
Frame = +1
Query: 382 EIEKLRENLKEKQNELFQLQRNSYKHKSSPXKEEI*TICTSTENSINKLYRQPKEEFRTD 561
E +++++ ++K+++ F L Y S ++ + NS+ +Y Q + T
Sbjct: 133 EDQEMKKKKRKKEDDTFALSYARYSITLSKLRDRFRVM----PNSVPAMYLQFMDNLATH 188
Query: 562 VNFNWNGGSVICCRRTLLCGVSHA 633
+NW G + R L G A
Sbjct: 189 TEYNWGGAVLAMLYRQLNNGAEKA 212
>03_05_0325 +
23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 349 RSSDDCDELQDEIEKLRENL-KEKQNELFQLQRNSYKHKSSPXKEEI*TICTSTENSIN 522
R++DDC L ++++ L +NL + Q E + + + K K++ E+ T +T+N IN
Sbjct: 349 RATDDCSMLFEKLDSLADNLADDMQKECLKGRTLTLKLKTAAF--EVRTRAVTTQNYIN 405
>12_01_1069 -
11060045-11060262,11060404-11060545,11060624-11060776,
11060942-11061013,11062774-11063082,11063323-11063378,
11066436-11066533,11066616-11066700,11066800-11067001,
11067471-11067542,11069555-11069624,11071829-11072038,
11072337-11072609,11073912-11074183,11075354-11075557
Length = 811
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 328 QTKLVARRSSDDCDELQDEIEKLRENLKEK--QNELFQLQRNSYKHKSSPXKEEI*TICT 501
QTKL + DDC+ Q +I+K+ + + K + +L Q + K K ++ C
Sbjct: 323 QTKLNSETKEDDCN-TQSDIKKVSRSARRKKLKRQLRQKAKEQLKEKEHCQEQPTVADCP 381
Query: 502 STEN 513
S+ N
Sbjct: 382 SSNN 385
>07_03_1462 +
26716197-26716484,26716618-26716746,26716963-26717055,
26717581-26717721,26718021-26718089,26718207-26718290,
26718784-26718964,26719055-26719171,26719245-26719303,
26719595-26719729,26719865-26720014,26720170-26720208
Length = 494
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 370 ELQDEIEKLRENLKEKQNELFQLQRNSYKHKS 465
++++EIE LRE L EK + L + + H+S
Sbjct: 243 DIENEIEVLREQLAEKSSNCVHLLKELHLHQS 274
>03_06_0205 -
32347636-32347646,32347762-32347801,32347959-32348060,
32348473-32348599,32348893-32350835,32351347-32351367
Length = 747
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 376 QDEIEKLRENLK-EKQNELFQLQRNSYKHKSSPXKEEI*TICTSTENSINKLYRQPKEE 549
+D + EN KQ + L+++ ++H + KEEI T S + + +++ +E
Sbjct: 286 EDHSSRAEENKSFRKQKSMVVLEKSDFRHLNGMSKEEIITYFKSEMSKLKRMHELDLQE 344
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,793,391
Number of Sequences: 37544
Number of extensions: 278826
Number of successful extensions: 754
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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