Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E10
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    46   3e-05
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    46   3e-05
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    43   4e-04
09_04_0621 - 19028701-19028877,19028980-19029072                       29   5.0  

>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 27/74 (36%), Positives = 38/74 (51%)
 Frame = +1

Query: 169 AANVKNLKALPTDAQLLNLYAHFXQATXGDADPANRPGLLDLKGKAKCDAWHXLAXLSXE 348
           A   K L    ++   L LY  + QAT GD + A RPG+   + +AK DAW  +   S E
Sbjct: 11  AEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDAWKAVEGKSKE 69

Query: 349 DAQKAYIEIVEGLI 390
           +A   YI  V+ L+
Sbjct: 70  EAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 27/73 (36%), Positives = 38/73 (52%)
 Frame = +1

Query: 169 AANVKNLKALPTDAQLLNLYAHFXQATXGDADPANRPGLLDLKGKAKCDAWHXLAXLSXE 348
           A  VK L    ++   L LY  + QAT GD +  +RPG+   + +AK DAW  +   S E
Sbjct: 11  AEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDAWKAVEGKSKE 69

Query: 349 DAQKAYIEIVEGL 387
           +A   YI  V+ L
Sbjct: 70  EAMSDYITKVKQL 82


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 26/74 (35%), Positives = 36/74 (48%)
 Frame = +1

Query: 169 AANVKNLKALPTDAQLLNLYAHFXQATXGDADPANRPGLLDLKGKAKCDAWHXLAXLSXE 348
           A   K L    ++   L LY  + QAT G      RPG+ +LK + K DAW  +   S E
Sbjct: 11  AEKAKTLPDTISNEDKLLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDAWKAVEGKSKE 69

Query: 349 DAQKAYIEIVEGLI 390
           +A   YI  V+ L+
Sbjct: 70  EAMADYITKVKQLL 83


>09_04_0621 - 19028701-19028877,19028980-19029072
          Length = 89

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 475 NTRDFSHHHRASDFFDAIFILHFCLTCFFFKKQIHIDFIKLSCS 606
           N ++ +++      F AI +L F    FFF   +HID    SCS
Sbjct: 48  NKKETNNNREGRGLFSAILVLQF----FFFSSGLHIDEAVNSCS 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,976,343
Number of Sequences: 37544
Number of extensions: 285287
Number of successful extensions: 422
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)