Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_E09
(1092 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.47
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.47
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.47
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 3.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 5.8
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 5.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 7.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.47
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 797 PXPPPPPPXXXFXXXXPPXPXXG 865
P PPPPPP F PP P G
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPG 766
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.47
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 797 PXPPPPPPXXXFXXXXPPXPXXG 865
P PPPPPP F PP P G
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPG 766
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.47
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 797 PXPPPPPPXXXFXXXXPPXPXXG 865
P PPPPPP F PP P G
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 4.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPG 349
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG 317
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 433 PXXXXGXPPXGGGXKXPPPPXG 498
P G PP GG PPPP G
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGG 333
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 3.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 84 PPPPPPPPPPTLKAPPP 100
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 797 PXPPPPPPXXXFXXXXPPXP 856
P PPPPPP PP P
Sbjct: 68 PPPPPPPPLISILQQAPPPP 87
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 85 PPPPPPPPPTLKAPPPP 101
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 3.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 1341 PPPPPPPPSDDLTPVPP 1357
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXP 845
PPPPPPPP F P
Sbjct: 609 PPPPPPPPPQSFGMAP 624
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 4.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXP 845
PPPPPPPP F P
Sbjct: 435 PPPPPPPPPQSFGMAP 450
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 7 PPPPPPPPPPPAASAPP 23
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 8 PPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 7 PPPPPPPPPPPAASAPP 23
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 8 PPPPPPPPPPAASAPPP 24
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 797 PXPPPPPPXXXFXXXXPPXPXXG 865
P PPPPPP PP P G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGG 598
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP F P
Sbjct: 1013 PPPPPPPPADFFANIAP 1029
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 29.1 bits (62), Expect = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP F P
Sbjct: 252 PPPPPPPPADFFANIAP 268
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP F P
Sbjct: 578 PPPPPPPPSFMFNGKVP 594
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 7.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 798 PPPPPPPPXXXFXXXPP 848
PPPPPPPP PP
Sbjct: 39 PPPPPPPPCGGGYEAPP 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,320,843
Number of Sequences: 27780
Number of extensions: 283842
Number of successful extensions: 5736
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2614
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2939888878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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