Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_E08
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 61 9e-10
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 61 9e-10
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 61 9e-10
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 61 9e-10
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 61 9e-10
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 61 9e-10
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 60 3e-09
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 60 3e-09
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 56 5e-08
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 56 5e-08
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 54 1e-07
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 54 1e-07
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 52 4e-07
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 52 4e-07
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 29 3.5
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 29 3.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.5
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF022978-2|AAG24183.1| 440|Caenorhabditis elegans Nuclear hormo... 29 6.0
U29488-12|AAA68769.3| 617|Caenorhabditis elegans Hypothetical p... 28 8.0
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 8.0
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
A++IN++V ENT + IK ++ DS++S
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIE 809
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 810 IPYKGDQSSLIXSVXKDKDGXT 875
+PYK + +L + K + G T
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLT 236
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
A++IN++V ENT + IK ++ DS++S
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIE 809
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 810 IPYKGDQSSLIXSVXKDKDGXT 875
+PYK + +L + K + G T
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLT 236
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
A++IN++V ENT + IK ++ DS++S
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIE 809
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 810 IPYKGDQSSLIXSVXKDKDGXT 875
+PYK + +L + K + G T
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLT 236
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
A++IN++V ENT + IK ++ DS++S
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIE 809
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 810 IPYKGDQSSLIXSVXKDKDGXT 875
+PYK + +L + K + G T
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLT 236
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
A++IN++V ENT + IK ++ DS++S
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIE 809
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 810 IPYKGDQSSLIXSVXKDKDGXT 875
+PYK + +L + K + G T
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLT 236
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 61.3 bits (142), Expect = 9e-10
Identities = 28/92 (30%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 619
A++IN++V ENT + IK ++ DS++S
Sbjct: 121 NKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG-DYKYGESAALNAQLIE 809
VL NA+YFK W +KF + T +F+ S D ++ ++ Y E+ Q++
Sbjct: 157 VLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLS 214
Query: 810 IPYKGDQSSLIXSVXKDKDGXT 875
+PYK + +L + K + G T
Sbjct: 215 LPYKDNTFALTIFLPKTRFGLT 236
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +2
Query: 404 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 583
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 584 IKDLVNPDSLSSATA 628
IKDL+ DS ++A A
Sbjct: 137 IKDLIPADSANNAFA 151
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +3
Query: 597 LIRTRSAQPQRGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-Y 773
LI SA LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P + +++ Y
Sbjct: 140 LIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDY 199
Query: 774 GESAALNAQLIEIPYKGDQSSLIXSVXKDKDG 869
E Q++ + Y + +L + K + G
Sbjct: 200 TEDVLF--QVLSLKYADPKFTLAIFLPKQRFG 229
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +2
Query: 404 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 583
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 584 IKDLVNPDSLSSATA 628
IKDL+ DS ++A A
Sbjct: 137 IKDLIPADSANNAFA 151
Score = 48.0 bits (109), Expect = 9e-06
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +3
Query: 597 LIRTRSAQPQRGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK-Y 773
LI SA LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P + + +++ Y
Sbjct: 140 LIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDY 199
Query: 774 GESAALNAQLIEIPYKGDQSSLIXSVXKDKDG 869
E Q++ + Y + +L + K + G
Sbjct: 200 TEDVLF--QVLSLKYADPKFTLAIFLPKQRFG 229
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 55.6 bits (128), Expect = 5e-08
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = +2
Query: 395 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 574
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 575 NNRIKDLVNPDSLSSATA 628
+I D++ PD+L A
Sbjct: 144 KGKIPDMIKPDNLKDVDA 161
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +3
Query: 597 LIRTRSAQPQRGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYG 776
+I+ + + +L+NAI+F+G W KF E ++ +F +S + VPM+ + DY Y
Sbjct: 150 MIKPDNLKDVDAILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYFYN 207
Query: 777 ESAALNAQLIEIPYKGDQSS 836
+ Q+I IP+K D+S+
Sbjct: 208 KDD--EWQVIGIPFK-DKSA 224
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 55.6 bits (128), Expect = 5e-08
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = +2
Query: 395 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 574
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 575 NNRIKDLVNPDSLSSATA 628
+I D++ PD+L A
Sbjct: 144 KGKIPDMIKPDNLKDVDA 161
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +3
Query: 597 LIRTRSAQPQRGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYG 776
+I+ + + +L+NAI+F+G W KF E ++ +F +S + VPM+ + DY Y
Sbjct: 150 MIKPDNLKDVDAILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYFYN 207
Query: 777 ESAALNAQLIEIPYKGDQSS 836
+ Q+I IP+K D+S+
Sbjct: 208 KDD--EWQVIGIPFK-DKSA 224
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +2
Query: 329 LSASLXDDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDV 505
L + D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D
Sbjct: 54 LLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADA 113
Query: 506 QNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATA 628
+++D + A + IN +V TN +IK++ DS+ A A
Sbjct: 114 KSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA 153
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 749
+L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 154 LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +2
Query: 329 LSASLXDDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDV 505
L + D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D
Sbjct: 54 LLSGATDEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADA 113
Query: 506 QNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATA 628
+++D + A + IN +V TN +IK++ DS+ A A
Sbjct: 114 KSLDLT-TPAAVQEINSFVNTATNGKIKNIATQDSIKDAIA 153
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 749
+L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 154 LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + F++ S L + KG E+ +AN ++ + + + + ++N+ ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLS 616
+A++IN++V ENT IK ++NPDS+S
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSIS 160
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAALNAQLIE 809
VL NA YFK W +KF + T R+F+ S++ + ++ R + KY E+ Q++
Sbjct: 166 VLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLS 223
Query: 810 IPYKGDQSSLIXSVXKDKDG 869
+PYK +L + K + G
Sbjct: 224 LPYKDTSFALSIFLPKTRFG 243
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +2
Query: 347 DDAIRTEFASKSRDLR-SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 523
D+ + F++ S L + KG E+ +AN ++ + + + + ++N+ ++F
Sbjct: 70 DEELEQHFSNISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFE 129
Query: 524 KNTVAAKSINDWVEENTNNRIKDLVNPDSLS 616
+A++IN++V ENT IK ++NPDS+S
Sbjct: 130 DQEASAEAINNFVSENTKGHIKKIINPDSIS 160
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +3
Query: 633 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGESAALNAQLIE 809
VL NA YFK W +KF + T R+F+ S++ + ++ R + KY E+ Q++
Sbjct: 166 VLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLS 223
Query: 810 IPYKGDQSSLIXSVXKDKDG 869
+PYK +L + K + G
Sbjct: 224 LPYKDTSFALSIFLPKTRFG 243
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 260 ENAERTTLXPWIIFHYFGKHSGGEVIVSIFEYIREICDGCH 138
E A++ T WI FH +HS I +FE IR+ CH
Sbjct: 22 EKAQKNTFTRWINFH-LEEHSSSGRIEDLFEDIRDGVLLCH 61
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 669 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 785
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 686
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 669 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 785
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 178
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 260 ENAERTTLXPWIIFHYFGKHSGGEVIVSIFEYIREICDGCH 138
E A++ T WI FH +HS I +FE IR+ CH
Sbjct: 22 EKAQKNTFTRWINFH-LEEHSSSGRIEDLFEDIRDGVLLCH 61
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 627 RGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAAL---NA 797
R V V+A Y + W KFDE + FYV + I +P++ K+G E NA
Sbjct: 130 RDVSVDAEY-RLNW--KFDEMKGREYQFYVDVYERIAMPLIKKKGSEPESEEYTFRIANA 186
Query: 798 QLIEIPYKGDQSS 836
EI K ++S
Sbjct: 187 DSYEISAKSAETS 199
>AF022978-2|AAG24183.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 130 protein.
Length = 440
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 251 ERTTLXPWIIFHYFGKHSGGEVIVSIFEYIREICDGCH 138
E T + + FHY GK GGE++ ++ + D H
Sbjct: 343 ELTYMLCQLCFHYAGKRYGGEILEVTEKFQENLADNLH 380
>U29488-12|AAA68769.3| 617|Caenorhabditis elegans Hypothetical
protein C56C10.1 protein.
Length = 617
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 767 IIAAFIHHGYFDCFVFAHVEVTVTGQSLVKFRTPCSLEIDGVDENT 630
++ H YFD FVF V + ++ + SL++DGV ++T
Sbjct: 387 LLGTVTHEEYFD-FVFERVPMRSCRDVVLSMMSLASLKLDGVPDDT 431
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 776 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 684
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,562
Number of Sequences: 27780
Number of extensions: 346953
Number of successful extensions: 916
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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