Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E04
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0447 + 29096853-29097033,29097812-29098146,29098651-290987...    29   6.6  
12_02_0959 + 24818310-24818369,24818689-24819136,24819265-248194...    28   8.7  

>02_05_0447 +
           29096853-29097033,29097812-29098146,29098651-29098782,
           29098870-29099142,29099295-29099477
          Length = 367

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -1

Query: 632 LSSPSGPVGVPTRGPARASVSACCPKTR 549
           LSSP  P   P   PAR SV+A  P  R
Sbjct: 12  LSSPPAPGARPQPRPARVSVAAAAPAAR 39


>12_02_0959 +
           24818310-24818369,24818689-24819136,24819265-24819482,
           24819651-24819929
          Length = 334

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -2

Query: 517 DYHYAHYRDTSCGCERHGVNSFYFYIYSISVFVSIVESCTARPRAVIVV 371
           DYHY  + +   G ER  + S         VFV ++++   R R +++V
Sbjct: 196 DYHYTRFANYLTGEERDEIFSLVSLQPGNPVFVVVLQTAHVRRRNILIV 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,173,222
Number of Sequences: 37544
Number of extensions: 466047
Number of successful extensions: 1346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)