Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E02
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    29   4.0  
07_01_0479 + 3606663-3607448                                           29   5.2  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   9.2  

>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -3

Query: 153 LWLT-SSKALGLGIIICHPGCN 91
           LWL  +S ++G G IICH GC+
Sbjct: 336 LWLVQNSNSIGQGYIICHLGCH 357


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/53 (28%), Positives = 17/53 (32%)
 Frame = +3

Query: 756 FPXGPXPPXXAXXKXCXPXSXXGXPPXXIXXKSXXFXPXXTPPXAXXLVPPPP 914
           FP GP PP     +   P       P           P   PP     +PPPP
Sbjct: 197 FPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPP 249


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/51 (29%), Positives = 16/51 (31%)
 Frame = +2

Query: 680 PPXKXFLXXXPXXAQNPXXGPFXGXFPQXPPPPLXXXXKXXPPXXXGWXTP 832
           PP   F    P     P   P    +P  PPPP        PP    W  P
Sbjct: 292 PPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPP---PPPPPPPPSFPWPFP 339


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,441,902
Number of Sequences: 37544
Number of extensions: 234952
Number of successful extensions: 670
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)