Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E01
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0139 - 11139004-11139031,11139300-11141017,11141408-111414...    31   1.6  
02_01_0098 + 717857-719252,719453-719511                               31   1.6  
02_01_0100 + 743467-744868,745066-745127                               30   2.8  
06_01_1126 - 9277885-9277935,9278129-9278209,9278297-9278350,927...    28   8.6  
03_05_0399 - 23799830-23800090,23803448-23803558,23803685-23803693     28   8.6  
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660...    28   8.6  

>10_06_0139 -
           11139004-11139031,11139300-11141017,11141408-11141477,
           11142520-11143361
          Length = 885

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 420 VKKFVEKLGNEEDDKLAVISDVES 491
           V +F+E+L N+ED KL V+S V S
Sbjct: 187 VSEFIERLANDEDQKLKVVSVVGS 210


>02_01_0098 + 717857-719252,719453-719511
          Length = 484

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 453 EDDKLAVISDVESIITFYCKSKNTTYTSNNGWIDI 557
           E D++  I D  S + F+C +K  T     GW+D+
Sbjct: 212 ERDRVLPIPDTASQVVFHCTTKVITLGGTIGWVDL 246


>02_01_0100 + 743467-744868,745066-745127
          Length = 487

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 453 EDDKLAVISDVESIITFYCKSKNTTYTSNNGWIDI 557
           E D++  I D  S + F+C +K  T     GW+D+
Sbjct: 215 ERDRVLPIPDTASQMVFHCTTKVITLGGTIGWVDL 249


>06_01_1126 -
           9277885-9277935,9278129-9278209,9278297-9278350,
           9278433-9278564,9278641-9278715,9279056-9279133,
           9279215-9279327,9279421-9279535,9280565-9280754,
           9281355-9281464,9281559-9281654,9281756-9281818,
           9281911-9281988,9282452-9282564,9282664-9282721,
           9282797-9282920,9282999-9283060,9283131-9283195,
           9283264-9283324,9284242-9284307,9284472-9284531,
           9284830-9284960,9285517-9285592,9285701-9285769,
           9286065-9286112,9286552-9286671,9286918-9287034,
           9287290-9287405,9288348-9288519,9289057-9289100,
           9290359-9290712,9291680-9291806
          Length = 1072

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 197 AGDDDDTWLIELESALLDGCTAQEINALTK 286
           AGD D  WL+E  +A LD  TA+++ A  +
Sbjct: 5   AGDGDQRWLVECLTATLD--TARDVRAFAE 32


>03_05_0399 - 23799830-23800090,23803448-23803558,23803685-23803693
          Length = 126

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +3

Query: 339 NCQDAGNQLLLFDEIFDLPNQNEL-----RDDVKKFVEKLGNEEDDKLAVI-SDVESIIT 500
           N  DAGN+L+L DE        E+     RDDV+  +E++  +   KL  +  + ESI++
Sbjct: 45  NLDDAGNELILSDEDVVRFQIGEVFAHMPRDDVETRLEQMKEDAAKKLERLEQEKESIVS 104

Query: 501 FYCKSKNTTY 530
              + K   Y
Sbjct: 105 QMAELKKILY 114


>03_02_1023 + 13265179-13265330,13265526-13265637,13265752-13266048,
            13266361-13266623,13267637-13267847,13268420-13268590,
            13268671-13268748,13269275-13269520,13269763-13271868,
            13272122-13273904,13274113-13274216,13274752-13275108,
            13275210-13275328,13276175-13276436,13276669-13276893,
            13277075-13277214,13278087-13278159,13278431-13278532,
            13278647-13279018,13279183-13279230,13279516-13279900,
            13280440-13280558
          Length = 2574

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 155  LSTNLNLSCQTKQMAGDDDDTWLIELESALLDGCTAQEINALTKGKK 295
            LS    +S    Q    DD TW++    A L  C  +E+  +  G+K
Sbjct: 2057 LSVGSEISADETQTPKSDDATWIVTGSRASLVKCLKKELVNVRNGRK 2103


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,072,634
Number of Sequences: 37544
Number of extensions: 356795
Number of successful extensions: 733
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)