Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_E01
         (887 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.92 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.6  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   2.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   3.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = -3

Query: 777 NNDFNXXEQYCSGVFFLYPKMNKVLDHGIEVSTL---IYGKVLHFLNSPLVYTILKSFQT 607
           NN  N  ++  S  F   P+      +G E  TL   I+G  L  L   L Y+ L S   
Sbjct: 215 NNSDNSFQRLTSSTFASDPRYTTFTING-ESFTLQSGIFGMALSPLTQNLYYSALSSHNL 273

Query: 606 NY 601
           NY
Sbjct: 274 NY 275


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 384  FDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITFYCKS 515
            F    +NE    +KK +EK  N +  +  V +  E  + F CK+
Sbjct: 1727 FHCMEKNEAAMKLKKRIEKGANPDLSQKPVSTTEELTVPFVCKA 1770


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 233 LVLSTKYHRRLLP 195
           L+LST+Y +RLLP
Sbjct: 68  LLLSTRYDKRLLP 80


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 233 LVLSTKYHRRLLP 195
           L+LST+Y +RLLP
Sbjct: 68  LLLSTRYDKRLLP 80


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 233 LVLSTKYHRRLLP 195
           L+LST+Y +RLLP
Sbjct: 68  LLLSTRYDKRLLP 80


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 233 LVLSTKYHRRLLP 195
           L+LST+Y +RLLP
Sbjct: 68  LLLSTRYDKRLLP 80


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -2

Query: 682 NLNIWQGTPFFEQPFGVYNFKILSNKL*VSDRGSFKLNKGNKISIQPLFEV*VVFFDL 509
           N+N W  TPF E+  G  N   +  K    D   F    GN +S +  F +    FD+
Sbjct: 68  NVNNWLWTPFIER--GPANRMYIEIKFTTRDCSLF---PGNALSCKETFSLLYYEFDV 120


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +2

Query: 614 KDFKIVYTKGLFKKWSTLPYIKVDTSIP*SRTLFIFGYKKNTPEQY 751
           +D  ++ T+      +TL Y +V +++P +          +TPEQ+
Sbjct: 291 RDEIVLLTEAYSSLENTLKYYEVGSNVPFNFKFITDANSSSTPEQF 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,032
Number of Sequences: 438
Number of extensions: 4443
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)