Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_D24
(907 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9 pro... 198 2e-50
AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderm... 198 2e-50
AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderm... 198 2e-50
U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen pro... 103 9e-22
M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein. 103 9e-22
AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein. 103 9e-22
BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7 pro... 87 6e-17
D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein. 86 1e-16
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 74 8e-13
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 74 8e-13
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 74 8e-13
>BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9
protein.
Length = 439
Score = 198 bits (483), Expect = 2e-50
Identities = 84/160 (52%), Positives = 120/160 (75%)
Frame = +3
Query: 120 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 299
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 300 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 479
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 480 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHF 599
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHF 160
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALYSND-ILLSDPNFLEESVCTSNT 780
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 162 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGAYLLVDPNEREERV----- 216
Query: 781 EEGINTAGGLLVLGMNXYREVCLLDLTG 864
GLLV+ MN +RE+C + +G
Sbjct: 217 ------MDGLLVIAMNKHREICTIQSSG 238
>AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 456
Score = 198 bits (483), Expect = 2e-50
Identities = 84/160 (52%), Positives = 120/160 (75%)
Frame = +3
Query: 120 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 299
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 300 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 479
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 480 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHF 599
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHF 160
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNT 780
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 162 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV----- 216
Query: 781 EEGINTAGGLLVLGMNXYREVCLLDLTG 864
GLLV+ MN +RE+C + +G
Sbjct: 217 ------MDGLLVIAMNKHREICTIQSSG 238
>AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 439
Score = 198 bits (483), Expect = 2e-50
Identities = 84/160 (52%), Positives = 120/160 (75%)
Frame = +3
Query: 120 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 299
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 300 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 479
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 480 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHF 599
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHF 160
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNT 780
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 162 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV----- 216
Query: 781 EEGINTAGGLLVLGMNXYREVCLLDLTG 864
GLLV+ MN +RE+C + +G
Sbjct: 217 ------MDGLLVIAMNKHREICTIQSSG 238
>U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen
protein.
Length = 372
Score = 103 bits (247), Expect = 9e-22
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +3
Query: 372 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 551
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 552 LTECASIATLASIAHF 599
+ + ASIA + ++ HF
Sbjct: 61 IIDAASIAAIVALCHF 76
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNT 780
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 78 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV----- 132
Query: 781 EEGINTAGGLLVLGMNXYREVCLLDLTG 864
GLLV+ MN +RE+C + +G
Sbjct: 133 ------MDGLLVIAMNKHREICTIQSSG 154
>M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein.
Length = 355
Score = 103 bits (247), Expect = 9e-22
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +3
Query: 372 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 551
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 552 LTECASIATLASIAHF 599
+ + ASIA + ++ HF
Sbjct: 61 IIDAASIAAIVALCHF 76
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNT 780
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 78 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV----- 132
Query: 781 EEGINTAGGLLVLGMNXYREVCLLDLTG 864
GLLV+ MN +RE+C + +G
Sbjct: 133 ------MDGLLVIAMNKHREICTIQSSG 154
>AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 103 bits (247), Expect = 9e-22
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +3
Query: 372 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 551
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 552 LTECASIATLASIAHF 599
+ + ASIA + ++ HF
Sbjct: 61 IIDAASIAAIVALCHF 76
Score = 65.7 bits (153), Expect = 2e-10
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 604 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNT 780
RPD + GD V ++T E+DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 78 RPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV----- 132
Query: 781 EEGINTAGGLLVLGMNXYREVCLLDLTG 864
GLLV+ MN +RE+C + +G
Sbjct: 133 ------MDGLLVIAMNKHREICTIQSSG 154
>BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7
protein.
Length = 291
Score = 87.4 bits (207), Expect = 6e-17
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +3
Query: 120 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILS 290
M LS EK +I V + R+DGR + R +++ + G V LG T IL
Sbjct: 1 MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV 60
Query: 291 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 470
V E+ PK +PNEG + V+ + A P+FE DL + L + + + +D
Sbjct: 61 GVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD 120
Query: 471 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 590
L++LCI E W L +++ +L GNL + SIA A++
Sbjct: 121 LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAAL 160
>D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein.
Length = 290
Score = 86.2 bits (204), Expect = 1e-16
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Frame = +3
Query: 135 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCE 305
LS EK +I V + R+DGR + R +++ + G V LG T IL V E
Sbjct: 5 LSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAE 64
Query: 306 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 485
+ PK +PNEG + V+ + A P+FE DL + L + + + +DL++LC
Sbjct: 65 MGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLC 124
Query: 486 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 590
I E W L +++ +L GNL + SIA A++
Sbjct: 125 ISPREHCWVLYVDVLLLECGGNLFDAISIAVKAAL 159
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 73.7 bits (173), Expect = 8e-13
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +3
Query: 156 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 326
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 327 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 506
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 507 WSLRINIKVLNHDGNLTECASIATLASI 590
W L ++ L++DGN+ + + A LA++
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAAL 160
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 73.7 bits (173), Expect = 8e-13
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +3
Query: 156 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 326
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 327 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 506
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 507 WSLRINIKVLNHDGNLTECASIATLASI 590
W L ++ L++DGN+ + + A LA++
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAAL 160
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 73.7 bits (173), Expect = 8e-13
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +3
Query: 156 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 326
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 11 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 70
Query: 327 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 506
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 71 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 130
Query: 507 WSLRINIKVLNHDGNLTECASIATLASI 590
W L ++ L++DGN+ + + A LA++
Sbjct: 131 WVLYCDLICLDYDGNILDACTFALLAAL 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,207,880
Number of Sequences: 237096
Number of extensions: 2643630
Number of successful extensions: 4812
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4806
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -