Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D24
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   1.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.8  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    23   5.1  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    23   5.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   5.1  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   5.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   5.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = +1

Query: 664 PIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAGGLLVLGMNXYREV 843
           P+   LY+ P+ +    Y +    S+P + E +V    +++ +NT     V+  N    +
Sbjct: 263 PVTNNLYYSPLLSHGLYYVDTEQFSNPQYEENNVQYEGSQDILNTQSFGKVVSKNGVLFL 322

Query: 844 CLLDLTGAA 870
            L+  +G A
Sbjct: 323 GLVGNSGIA 331


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 679 LYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEE 786
           LY Y       + SN+ L+ D  F++ES    + EE
Sbjct: 321 LYKYLQLIENVIPSNEELICDKRFVDESANNLSIEE 356


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 679 LYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEE 786
           LY Y       + SN+ L+ D  F++ES    + EE
Sbjct: 336 LYKYLQLIENVIPSNEELICDKRFVDESANNLSIEE 371


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 147 EKNFIQKIVSQGHRLDGRNFNETRKLDISFG 239
           EK  + +++S  + L+    NE+  L++ FG
Sbjct: 55  EKRLLNELLSSYNTLERPVANESEPLEVKFG 85


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 147 EKNFIQKIVSQGHRLDGRNFNETRKLDISFG 239
           EK  + +++S  + L+    NE+  L++ FG
Sbjct: 55  EKRLLNELLSSYNTLERPVANESEPLEVKFG 85


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 769 TSNTEEGINTAGGLLVLGMNXYREVCL 849
           T+N  +G+   GG  +LG+     VCL
Sbjct: 367 TTNGRKGLLKGGGGYLLGIQCLTVVCL 393


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 656 RKTQYQQFCIIILCVQHLHCTVMISYSP 739
           RKT +    +II CV     TV++ Y P
Sbjct: 247 RKTLFYTVNLIIPCVGITFLTVLVFYLP 274


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +1

Query: 664 PIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINT 798
           P+   LY+ P+ +    Y N        F E +V    +E+ +NT
Sbjct: 258 PVTNNLYYSPLASHGLYYVNTAPFMKSQFGENNVQYQGSEDILNT 302


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 91  FTKKYEPITKCVILVYRIVKRISYKRSYLKDIVW 192
           F+     + K V L+YRI+      +++LK   W
Sbjct: 93  FSNSISQLRKEVSLLYRILLGAKDYQTFLKTAAW 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,880
Number of Sequences: 438
Number of extensions: 5675
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)