Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D21
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409...    30   2.1  
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415...    29   3.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
04_04_0431 + 25155091-25155384                                         28   8.7  
02_01_0174 - 1193696-1193726,1193822-1194175,1194307-1194542,119...    28   8.7  

>09_03_0218 +
           13539481-13540082,13540171-13540276,13540645-13540960,
           13541187-13541263,13541269-13541895,13542783-13543112,
           13543442-13543747,13543824-13543896,13544004-13544089,
           13544219-13544396,13545311-13545756
          Length = 1048

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -3

Query: 765 WRXXTXGGYGKGATLSR-RGKRRXGXPXXGRGRNRGAHEGXXR 640
           W      G G+G    R RG+ R G    GRGR RG   G  R
Sbjct: 35  WGVEMERGRGRGRGRGRGRGRGRRGGAVRGRGRGRGRCRGRGR 77


>07_03_0329 +
           16840051-16840917,16840999-16841342,16841444-16841574,
           16841671-16841792,16841877-16841983,16842104-16842236,
           16842342-16842458,16842560-16842667,16842716-16842742,
           16842759-16842830,16843462-16843584,16843671-16843833,
           16844140-16844264,16844355-16844489,16844574-16844677,
           16844772-16844834,16844930-16844993,16845186-16845318,
           16845414-16845487,16845603-16845697,16845799-16845830,
           16846201-16846355
          Length = 1097

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = -3

Query: 747 GGYGKGATLSRRGKRRXGXPXXGRGRNRGAHEGXXRGXR 631
           GGYG+G     RG+ R G P  G GR RG  +G   G R
Sbjct: 20  GGYGRGGG-GGRGRGRDGAPYSG-GRGRG-QDGSYPGGR 55


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 311 NESAN---ARGEAVCVLGALPLPRSLTRCAR 394
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_04_0431 + 25155091-25155384
          Length = 97

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = -3

Query: 771 RXWRXXTXGGYGKGATLSRRGKRRXGXPXXGRGRNRGAHEG 649
           R WR    GG   G   + R  R  G     RGR RG+  G
Sbjct: 20  RRWRRRRRGGGVGGTVEAERQSRHGGGGRRRRGRRRGSGGG 60


>02_01_0174 -
           1193696-1193726,1193822-1194175,1194307-1194542,
           1194629-1194741,1195963-1196161,1196427-1196513
          Length = 339

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 738 GKGATLSRRGKRRXGXPXXGRGRNRGAHEGXXRGXR 631
           G+ A+   RG+ R G P  GRGR RG+ +    G R
Sbjct: 253 GRSASPYGRGRER-GSPDYGRGRERGSPDYGRGGDR 287


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,383,086
Number of Sequences: 37544
Number of extensions: 318537
Number of successful extensions: 804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)