Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D17
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0228 - 42154400-42154498,42155120-42155196,42156341-421564...    29   5.0  

>01_07_0228 -
           42154400-42154498,42155120-42155196,42156341-42156425,
           42156511-42156956,42157070-42157194,42157273-42157523
          Length = 360

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +1

Query: 124 TTLSVIIATFFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSEPDGSY 285
           TT+ V+I    NM +E+ +   SD K  N+V+  DY ++  +   + ++ DGS+
Sbjct: 4   TTVDVMIRKGTNMRLESYEF-LSDFKHGNAVVLLDYTESGNKGSFIVTQVDGSF 56


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,954,531
Number of Sequences: 37544
Number of extensions: 327976
Number of successful extensions: 767
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)