Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP10_F_D17
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    33   0.36 
AC006814-2|AAP46269.1|  430|Caenorhabditis elegans Aldehyde dehy...    29   4.4  
AC006814-1|AAP46268.1|  499|Caenorhabditis elegans Aldehyde dehy...    29   4.4  
AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical ...    29   5.8  

>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = +2

Query: 143 LRHFSICRLKQVILANPTENYTIQ*LPLTTMMQPKDASNFNPNR 274
           LR+F    L++++L +PT+N  I+   L  M Q K+A NF  +R
Sbjct: 431 LRNFKSGILQEIVLGSPTDNADIE--KLVDMRQWKEAKNFESSR 472


>AC006814-2|AAP46269.1|  430|Caenorhabditis elegans Aldehyde
           dehydrogenase protein12, isoform b protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 549 VYVLVGIEQSLFQNLXPKYNQRLKMGDPVKDDER 650
           V+V  GI  S  + +  + N +LK+GDP+ +D R
Sbjct: 299 VFVQKGILASFTEAIVQEANDKLKVGDPLLEDTR 332


>AC006814-1|AAP46268.1|  499|Caenorhabditis elegans Aldehyde
           dehydrogenase protein12, isoform a protein.
          Length = 499

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 549 VYVLVGIEQSLFQNLXPKYNQRLKMGDPVKDDER 650
           V+V  GI  S  + +  + N +LK+GDP+ +D R
Sbjct: 299 VFVQKGILASFTEAIVQEANDKLKVGDPLLEDTR 332


>AL132848-3|CAB60386.1|  327|Caenorhabditis elegans Hypothetical
           protein Y47H10A.4 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 151 FFNMSVEASDSGKSDRKLYNSVITADYDDATKRCEQLQSE 270
           FFN+++E  DSG+ +    N V   DY   TK  E  Q +
Sbjct: 41  FFNLNIEVPDSGQGEN---NMVSFLDYISQTKCLEDAQPD 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,275,829
Number of Sequences: 27780
Number of extensions: 317145
Number of successful extensions: 857
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)