Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP10_F_D12
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 81 8e-16
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 51 9e-07
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 40 0.003
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 40 0.003
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 40 0.003
Z81067-2|CAB02977.1| 274|Caenorhabditis elegans Hypothetical pr... 31 0.82
AY305834-1|AAR11979.1| 327|Caenorhabditis elegans nuclear recep... 30 1.9
AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear recep... 30 1.9
AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormo... 30 1.9
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 4.4
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 29 4.4
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 29 4.4
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 28 7.6
AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical ... 28 7.6
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 28 7.6
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 81.4 bits (192), Expect = 8e-16
Identities = 42/125 (33%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
Frame = +1
Query: 178 MLYLEDYLEMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQA 357
ML+L+D+LEM++ LP EL++R E+R +D V++ ++ + + F R G ++
Sbjct: 1 MLFLDDFLEMLDELPAELKERSDEIRRIDNEVESRLNRNREAINDFFE--RTGVNMPEEQ 58
Query: 358 NTEFSDIKRGYAKTLEE-ADEKTTLANQMYDLVDRYLRRLDTELHKFKCELEADNKGITE 534
E + + T+ A K +A +M +L+ +Y L+ E F+CE+EADN G+TE
Sbjct: 59 RKERCKVLQEEFSTIRVLAQRKYLIAEKMQELLKKYKVHLEKEKTTFQCEMEADNSGVTE 118
Query: 535 LLEKR 549
++EKR
Sbjct: 119 MIEKR 123
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 51.2 bits (117), Expect = 9e-07
Identities = 34/134 (25%), Positives = 67/134 (50%)
Frame = +1
Query: 145 LTNLKHKTLTKMLYLEDYLEMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGG 324
+TN++H Y++D +++E + +E+ R + + D + + +K + +F
Sbjct: 1 MTNMQH-------YMDDINDLMEGMNEEMTKRLARVTKWDEQIDVDSAEAQKFEKIMFD- 52
Query: 325 CRRGEINTDQANTEFSDIKRGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTELHKFKCE 504
++ E +A + +D+K + E A++KT LA + + V +L+ + KCE
Sbjct: 53 TQKSEKERVEAGRKLADLK---CRIRELAEKKTLLAERNHRTVQAVYTKLNELAYHCKCE 109
Query: 505 LEADNKGITELLEK 546
LE DN G TE E+
Sbjct: 110 LETDNPGSTEQRER 123
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/98 (26%), Positives = 53/98 (54%)
Frame = +1
Query: 202 EMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQANTEFSDIK 381
E++EH +E+ DR+ RE++ ++N D LE+R+R L + D+ + +++K
Sbjct: 1073 ELVEHKIREVNDRW--KRELE-RLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK 1129
Query: 382 RGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTELHKF 495
R +A +++ L + + L D++L LD E ++
Sbjct: 1130 RKHAAEIDK------LKSDISALHDKHLSDLDDEKEQY 1161
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/98 (26%), Positives = 53/98 (54%)
Frame = +1
Query: 202 EMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQANTEFSDIK 381
E++EH +E+ DR+ RE++ ++N D LE+R+R L + D+ + +++K
Sbjct: 1146 ELVEHKIREVNDRW--KRELE-RLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
Query: 382 RGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTELHKF 495
R +A +++ L + + L D++L LD E ++
Sbjct: 1203 RKHAAEIDK------LKSDISALHDKHLSDLDDEKEQY 1234
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/98 (26%), Positives = 53/98 (54%)
Frame = +1
Query: 202 EMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQANTEFSDIK 381
E++EH +E+ DR+ RE++ ++N D LE+R+R L + D+ + +++K
Sbjct: 1146 ELVEHKIREVNDRW--KRELE-RLENEKDDLERRIRELEDELSQIGRGNDKTENDITELK 1202
Query: 382 RGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTELHKF 495
R +A +++ L + + L D++L LD E ++
Sbjct: 1203 RKHAAEIDK------LKSDISALHDKHLSDLDDEKEQY 1234
>Z81067-2|CAB02977.1| 274|Caenorhabditis elegans Hypothetical
protein F23A7.3 protein.
Length = 274
Score = 31.5 bits (68), Expect = 0.82
Identities = 25/115 (21%), Positives = 49/115 (42%)
Frame = +1
Query: 190 EDYLEMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQANTEF 369
ED + + ++L + E+ E+ +S+ N LE RTL C R + + + E
Sbjct: 140 EDTNKEFNEMKKDLYETKRELTEVRISLMN----LEAEHRTLQTNCNRKDTQLFERHEEI 195
Query: 370 SDIKRGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTELHKFKCELEADNKGITE 534
+K ++ + + QM + + + + + K K E+ A +K I E
Sbjct: 196 QQLKDHIQWKSKDTEVAAKMVFQMQNKHKEEVEKYTSTISKLKEEVVAKDKEIVE 250
>AY305834-1|AAR11979.1| 327|Caenorhabditis elegans nuclear receptor
NHR-13 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 646 DSXGNRDXNVXFLKQYVXH*LRHTGCTWXVILLFG 750
D G R NV Y+ +RH C++ +I +FG
Sbjct: 278 DDVGERFGNVMMALNYIMEQIRHVNCSFVMISIFG 312
>AF083228-1|AAD03686.1| 415|Caenorhabditis elegans nuclear receptor
NHR-13 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 646 DSXGNRDXNVXFLKQYVXH*LRHTGCTWXVILLFG 750
D G R NV Y+ +RH C++ +I +FG
Sbjct: 366 DDVGERFGNVMMALNYIMEQIRHVNCSFVMISIFG 400
>AC006810-3|AAF59634.2| 414|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 13, isoform a protein.
Length = 414
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 646 DSXGNRDXNVXFLKQYVXH*LRHTGCTWXVILLFG 750
D G R NV Y+ +RH C++ +I +FG
Sbjct: 365 DDVGERFGNVMMALNYIMEQIRHVNCSFVMISIFG 399
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.1 bits (62), Expect = 4.4
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Frame = +1
Query: 202 EMIEHLPQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQANTEFSDIK 381
++++ +LRD EM++M N+D LE +TL R + + ++ + K
Sbjct: 848 DLVKQENTKLRDELQEMQKMSKKRSQNLDELENMHKTLLVDHSRLQQLHNLLTRDYDEAK 907
Query: 382 RGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTEL-------------HKFKCELEADN- 519
+ +++E + + Q ++ +R L+ +L HK C + +N
Sbjct: 908 K---ESMELRQKVQNIPRQQAVFMNANIRELEAKLSEEISRREQLEKEHKM-CRIHCENL 963
Query: 520 -KGITELLEKR---SLEL 561
+ ITEL++ R SLEL
Sbjct: 964 RRDITELVQTRDELSLEL 981
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 288 VHVILDRQIHFSHFSKSVSQFLR*MFYHFQIIFKIQHFG 172
VH ++D +HF+H + V + ++ +H +IF + G
Sbjct: 852 VHGLMDENVHFAHLTHLVDECIKKGKWHELVIFPNERHG 890
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 288 VHVILDRQIHFSHFSKSVSQFLR*MFYHFQIIFKIQHFG 172
VH ++D +HF+H + V + ++ +H +IF + G
Sbjct: 856 VHGLMDENVHFAHLTHLVDECIKKGKWHELVIFPNERHG 894
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 358 NTEFSDIKRGYAKTLEEADEKTTLANQMYDLVDRYLRRLDTELHKFKCELEADNK 522
N + SDI+ +K E+ADE +LA ++++ +R R + EL + E+E K
Sbjct: 253 NGDMSDIELEASKMKEQADEMRSLAEEVFN--ER--RAKEEELQGLEIEVEEQKK 303
>AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical
protein Y26D4A.10 protein.
Length = 546
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 238 RFTEMREMDLSVQNNMDTLEKRVRTLFG-GCR--RGEINTDQANTEFSDIKRGYAKT 399
R ++ +MD + N D LEKR R L C+ + +T+ + + FSD YA T
Sbjct: 476 RKRKLMQMDNRLDNEADILEKRARALEDQKCKIHPTDDHTNFSRSNFSDYPNEYADT 532
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 220 PQELRDRFTEMREMDLSVQNNMDTLEKRVRTLFGGCRRGEINTDQANTEFSDIKRGYAKT 399
P ++ D +++E L+ NN+D + R E +AN E ++ K
Sbjct: 341 PDQITDLTGKIKE-SLAKINNIDEILNETRGNKSIAANLESRAVKANKEAELLQ----KA 395
Query: 400 LEEADEKTTLANQMYDLVDRYLRRLDT 480
+EE E LA+Q Y+ V L +DT
Sbjct: 396 MEEIREALQLADQAYNNVTSVLEEIDT 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,144,499
Number of Sequences: 27780
Number of extensions: 281461
Number of successful extensions: 768
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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